RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 QSER1Q2KHR3 1735 aa29.26■■■□□ 2.27
RUNDC3A-201ENST00000225441 PRR5LQ6MZQ0 368 aa29.25■■■□□ 2.27
RUNDC3A-201ENST00000225441 RIPOR2Q9Y4F9 1068 aa29.25■■■□□ 2.27
RUNDC3A-201ENST00000225441 POLRMTO00411 1230 aaKnown RBP29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 TYRO3Q06418 890 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 RIC1Q4ADV7 1423 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 H3BQV1 296 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 LIG1P18858 919 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 EXOSC10Q01780 885 aaKnown RBP29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 COL9A3Q14050 684 aaPredicted RBP29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 NOLC1Q14978 699 aaKnown RBP eCLIP29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 IFFO2Q5TF58 517 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 BRF1Q92994 677 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 CNNM1Q9NRU3 951 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 CEP126Q9P2H0 1117 aa29.24■■■□□ 2.27
RUNDC3A-201ENST00000225441 TNRC6CQ9HCJ0 1690 aaKnown RBP29.23■■■□□ 2.27
RUNDC3A-201ENST00000225441 DDX46Q7L014 1031 aaKnown RBP29.23■■■□□ 2.27
RUNDC3A-201ENST00000225441 UQCRHLA0A096LP55 91 aa29.22■■■□□ 2.27
RUNDC3A-201ENST00000225441 UQCRHP07919 91 aa29.22■■■□□ 2.27
RUNDC3A-201ENST00000225441 STK3Q13188 491 aa29.22■■■□□ 2.27
RUNDC3A-201ENST00000225441 MRVI1Q9Y6F6 885 aa29.22■■■□□ 2.27
RUNDC3A-201ENST00000225441 RNF113AO15541 343 aaKnown RBP29.22■■■□□ 2.27
RUNDC3A-201ENST00000225441 CDC5LQ99459 802 aaKnown RBP29.22■■■□□ 2.27
RUNDC3A-201ENST00000225441 DACT1Q9NYF0 836 aa29.22■■■□□ 2.27
RUNDC3A-201ENST00000225441 CTAGE5O15320 804 aa29.21■■■□□ 2.27
RUNDC3A-201ENST00000225441 FGD1P98174 961 aa29.21■■■□□ 2.27
RUNDC3A-201ENST00000225441 ZNF274Q96GC6 653 aaPredicted RBP29.21■■■□□ 2.27
RUNDC3A-201ENST00000225441 IGHMBP2P38935 993 aaKnown RBP29.2■■■□□ 2.27
RUNDC3A-201ENST00000225441 ST5P78524 1137 aa29.2■■■□□ 2.27
RUNDC3A-201ENST00000225441 METTL24Q5JXM2 366 aa29.2■■■□□ 2.27
RUNDC3A-201ENST00000225441 CCDC129Q6ZRS4 1044 aa29.2■■■□□ 2.27
RUNDC3A-201ENST00000225441 NEUROD6Q96NK8 337 aa29.2■■■□□ 2.27
RUNDC3A-201ENST00000225441 SEC62Q99442 399 aaKnown RBP29.2■■■□□ 2.27
RUNDC3A-201ENST00000225441 MPHOSPH8Q99549 860 aa29.2■■■□□ 2.27
RUNDC3A-201ENST00000225441 ZFYP08048 801 aaPredicted RBP29.2■■■□□ 2.26
RUNDC3A-201ENST00000225441 SCRN1Q12765 414 aa29.2■■■□□ 2.26
RUNDC3A-201ENST00000225441 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.2■■■□□ 2.26
RUNDC3A-201ENST00000225441 RGS22Q8NE09 1264 aa29.2■■■□□ 2.26
RUNDC3A-201ENST00000225441 AKAP2Q9Y2D5 859 aa29.2■■■□□ 2.26
RUNDC3A-201ENST00000225441 GOLIM4O00461 696 aa29.19■■■□□ 2.26
RUNDC3A-201ENST00000225441 JAK2O60674 1132 aa29.19■■■□□ 2.26
RUNDC3A-201ENST00000225441 CTNNA3Q9UI47 895 aa29.19■■■□□ 2.26
RUNDC3A-201ENST00000225441 COL4A1P02462 1669 aa29.18■■■□□ 2.26
RUNDC3A-201ENST00000225441 LAMA4Q16363 1823 aa29.18■■■□□ 2.26
RUNDC3A-201ENST00000225441 IFIT1P09914 478 aaKnown RBP29.18■■■□□ 2.26
RUNDC3A-201ENST00000225441 NSUN7Q8NE18 718 aaKnown RBP29.18■■■□□ 2.26
RUNDC3A-201ENST00000225441 TFIP11Q9UBB9 837 aaKnown RBP29.18■■■□□ 2.26
RUNDC3A-201ENST00000225441 RCOR1Q9UKL0 485 aa29.18■■■□□ 2.26
RUNDC3A-201ENST00000225441 MROH5Q6ZUA9 1318 aa29.18■■■□□ 2.26
RUNDC3A-201ENST00000225441 EVCP57679 992 aa29.17■■■□□ 2.26
RUNDC3A-201ENST00000225441 FAM173BQ6P4H8 233 aa29.17■■■□□ 2.26
RUNDC3A-201ENST00000225441 STOX1Q6ZVD7 989 aa29.17■■■□□ 2.26
RUNDC3A-201ENST00000225441 ZNF396Q96N95 335 aaPredicted RBP29.17■■■□□ 2.26
RUNDC3A-201ENST00000225441 ANKRD18AQ8IVF6 992 aa29.17■■■□□ 2.26
RUNDC3A-201ENST00000225441 TDRD7Q8NHU6 1098 aaKnown RBP29.17■■■□□ 2.26
RUNDC3A-201ENST00000225441 A0A1B0GUL7 405 aa29.16■■■□□ 2.26
RUNDC3A-201ENST00000225441 HSPD1P10809 573 aaKnown RBP29.16■■■□□ 2.26
RUNDC3A-201ENST00000225441 VGLL2Q8N8G2 317 aa29.16■■■□□ 2.26
RUNDC3A-201ENST00000225441 MYRIPQ8NFW9 859 aa29.16■■■□□ 2.26
RUNDC3A-201ENST00000225441 PGBD1Q96JS3 809 aa29.16■■■□□ 2.26
RUNDC3A-201ENST00000225441 NRXN2Q9P2S2 1712 aa29.16■■■□□ 2.26
RUNDC3A-201ENST00000225441 TIMM10P62072 90 aa29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 TPRNQ4KMQ1 711 aa29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 MSL1Q68DK7 614 aa29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 BICD2Q8TD16 824 aa29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 MYH15Q9Y2K3 1946 aa29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 MMP10P09238 476 aa29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 KIAA1524Q8TCG1 905 aa29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 TTC12Q9H892 705 aaPredicted RBP29.15■■■□□ 2.26
RUNDC3A-201ENST00000225441 SALL1Q9NSC2 1324 aa29.14■■■□□ 2.26
RUNDC3A-201ENST00000225441 E7EWF7 191 aa29.14■■■□□ 2.26
RUNDC3A-201ENST00000225441 CCDC158Q5M9N0 1113 aa29.14■■■□□ 2.26
RUNDC3A-201ENST00000225441 NDUFB9Q9Y6M9 179 aa29.14■■■□□ 2.26
RUNDC3A-201ENST00000225441 AP5Z1O43299 807 aa29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 PDE8BO95263 885 aa29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 CELF1Q92879 486 aaKnown RBP29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 PARP3Q9Y6F1 533 aa29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 MAST3O60307 1309 aa29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 GTF2F1P35269 517 aaKnown RBP eCLIP29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 ATP2B3Q16720 1220 aa29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 DNTTIP2Q5QJE6 756 aaKnown RBP29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 CBX8Q9HC52 389 aa29.13■■■□□ 2.25
RUNDC3A-201ENST00000225441 ADD1P35611 737 aaKnown RBP29.12■■■□□ 2.25
RUNDC3A-201ENST00000225441 CAMK4Q16566 473 aa29.12■■■□□ 2.25
RUNDC3A-201ENST00000225441 ANO6Q4KMQ2 910 aa29.12■■■□□ 2.25
RUNDC3A-201ENST00000225441 BSDC1Q9NW68 430 aaPredicted RBP29.12■■■□□ 2.25
RUNDC3A-201ENST00000225441 PTPDC1A2A3K4 754 aa29.11■■■□□ 2.25
RUNDC3A-201ENST00000225441 WDR19Q8NEZ3 1342 aa29.11■■■□□ 2.25
RUNDC3A-201ENST00000225441 TAF1P21675 1872 aa29.11■■■□□ 2.25
RUNDC3A-201ENST00000225441 RPS8P62241 208 aaKnown RBP29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 CRY2Q49AN0 593 aa29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 ZNF830Q96NB3 372 aaPredicted RBP29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 DTNBO60941 627 aa29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 NR1I2O75469 434 aa29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 CTDNEP1O95476 244 aa29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 CDC25BP30305 580 aa29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 PLCB2Q00722 1185 aa29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 HELBQ8NG08 1087 aaPredicted RBP29.1■■■□□ 2.25
RUNDC3A-201ENST00000225441 DDX11Q96FC9 970 aa29.09■■■□□ 2.25
RUNDC3A-201ENST00000225441 PDIA3P30101 505 aaKnown RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms