RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 SMIM5Q71RC9 77 aa20.77■□□□□ 0.92
GCDH-201ENST00000222214 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
GCDH-201ENST00000222214 NSUN7Q8NE18 718 aaKnown RBP20.77■□□□□ 0.92
GCDH-201ENST00000222214 TAF1P21675 1872 aa20.76■□□□□ 0.91
GCDH-201ENST00000222214 MBD4O95243 580 aa20.76■□□□□ 0.91
GCDH-201ENST00000222214 ZSCAN16Q9H4T2 348 aaPredicted RBP20.76■□□□□ 0.91
GCDH-201ENST00000222214 TMEM63CQ9P1W3 806 aa20.76■□□□□ 0.91
GCDH-201ENST00000222214 DNM1Q05193 864 aaKnown RBP20.76■□□□□ 0.91
GCDH-201ENST00000222214 IFNL3Q8IZI9 196 aa20.76■□□□□ 0.91
GCDH-201ENST00000222214 NAPBQ9H115 298 aa20.76■□□□□ 0.91
GCDH-201ENST00000222214 GDPD2Q9HCC8 539 aa20.76■□□□□ 0.91
GCDH-201ENST00000222214 UBR3Q6ZT12 1888 aa20.75■□□□□ 0.91
GCDH-201ENST00000222214 H3BQV1 296 aa20.75■□□□□ 0.91
GCDH-201ENST00000222214 JAK2O60674 1132 aa20.75■□□□□ 0.91
GCDH-201ENST00000222214 IFFO2Q5TF58 517 aa20.75■□□□□ 0.91
GCDH-201ENST00000222214 NAA16Q6N069 864 aaPredicted RBP20.75■□□□□ 0.91
GCDH-201ENST00000222214 AMIGO3Q86WK7 504 aa20.75■□□□□ 0.91
GCDH-201ENST00000222214 IGSF3O75054 1194 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 ELP1O95163 1332 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 GYG1P46976 350 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 FBXO33Q7Z6M2 555 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 FAM84BQ96KN1 310 aaPredicted RBP20.74■□□□□ 0.91
GCDH-201ENST00000222214 SCAND2PQ9GZW5 306 aaPredicted RBP20.74■□□□□ 0.91
GCDH-201ENST00000222214 CNNM2Q9H8M5 875 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 SALL1Q9NSC2 1324 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 PTPDC1A2A3K4 754 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 FIBPO43427 364 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 CHST3Q7LGC8 479 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 KRT27Q7Z3Y8 459 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 TMEM87BQ96K49 555 aa20.74■□□□□ 0.91
GCDH-201ENST00000222214 NSFL1CQ9UNZ2 370 aaKnown RBP20.74■□□□□ 0.91
GCDH-201ENST00000222214 ANTXR2P58335 489 aa20.73■□□□□ 0.91
GCDH-201ENST00000222214 NFIXQ14938 502 aa20.73■□□□□ 0.91
GCDH-201ENST00000222214 LRSAM1Q6UWE0 723 aa20.73■□□□□ 0.91
GCDH-201ENST00000222214 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
GCDH-201ENST00000222214 NBPF3Q9H094 633 aa20.73■□□□□ 0.91
GCDH-201ENST00000222214 RBM27Q9P2N5 1060 aaKnown RBP20.73■□□□□ 0.91
GCDH-201ENST00000222214 BRPF3Q9ULD4 1205 aa20.73■□□□□ 0.91
GCDH-201ENST00000222214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.72■□□□□ 0.91
GCDH-201ENST00000222214 GADD45BO75293 160 aaPredicted RBP20.72■□□□□ 0.91
GCDH-201ENST00000222214 LETM1O95202 739 aaPredicted RBP20.72■□□□□ 0.91
GCDH-201ENST00000222214 TM4SF1P30408 202 aa20.72■□□□□ 0.91
GCDH-201ENST00000222214 TBC1D10CQ8IV04 446 aa20.72■□□□□ 0.91
GCDH-201ENST00000222214 RGS22Q8NE09 1264 aa20.72■□□□□ 0.91
GCDH-201ENST00000222214 ARMT1Q9H993 441 aa20.72■□□□□ 0.91
GCDH-201ENST00000222214 NAP1L2Q9ULW6 460 aaPredicted RBP20.72■□□□□ 0.91
GCDH-201ENST00000222214 ANGEL1Q9UNK9 670 aaKnown RBP20.72■□□□□ 0.91
GCDH-201ENST00000222214 CHD4Q14839 1912 aa20.72■□□□□ 0.91
GCDH-201ENST00000222214 GSG1L2A8MUP6 293 aa20.72■□□□□ 0.91
GCDH-201ENST00000222214 CTDNEP1O95476 244 aa20.72■□□□□ 0.91
GCDH-201ENST00000222214 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
GCDH-201ENST00000222214 TNRC6CQ9HCJ0 1690 aaKnown RBP20.71■□□□□ 0.91
GCDH-201ENST00000222214 MYH13Q9UKX3 1938 aa20.71■□□□□ 0.91
GCDH-201ENST00000222214 KLF18A0A0U1RQI7 1052 aa20.71■□□□□ 0.91
GCDH-201ENST00000222214 CYP7A1P22680 504 aa20.71■□□□□ 0.91
GCDH-201ENST00000222214 KRT23Q9C075 422 aa20.71■□□□□ 0.91
GCDH-201ENST00000222214 EPB41L4AQ9HCS5 686 aaPredicted RBP20.71■□□□□ 0.91
GCDH-201ENST00000222214 RAI14Q9P0K7 980 aa20.71■□□□□ 0.91
GCDH-201ENST00000222214 ABCF2Q9UG63 623 aa20.71■□□□□ 0.91
GCDH-201ENST00000222214 SLC4A4Q9Y6R1 1079 aa20.71■□□□□ 0.91
GCDH-201ENST00000222214 HIBADHP31937 336 aaKnown RBP20.7■□□□□ 0.9
GCDH-201ENST00000222214 GRAPQ13588 217 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 GRAPLQ8TC17 118 aaPredicted RBP20.7■□□□□ 0.9
GCDH-201ENST00000222214 DDX11Q96FC9 970 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 MTA3Q9BTC8 594 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 BRWD3Q6RI45 1802 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 COL1A1P02452 1464 aaPredicted RBP20.7■□□□□ 0.9
GCDH-201ENST00000222214 TDO2P48775 406 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 CCDC183Q5T5S1 534 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 FERMT3Q86UX7 667 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 LCORLQ8N3X6 602 aa20.7■□□□□ 0.9
GCDH-201ENST00000222214 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
GCDH-201ENST00000222214 GOLGA8BA8MQT2 603 aa20.69■□□□□ 0.9
GCDH-201ENST00000222214 RESTQ13127 1097 aa20.69■□□□□ 0.9
GCDH-201ENST00000222214 AKNAD1Q5T1N1 836 aa20.69■□□□□ 0.9
GCDH-201ENST00000222214 ATL3Q6DD88 541 aa20.69■□□□□ 0.9
GCDH-201ENST00000222214 ANP32BQ92688 251 aaKnown RBP20.69■□□□□ 0.9
GCDH-201ENST00000222214 RNF41Q9H4P4 317 aaPredicted RBP20.69■□□□□ 0.9
GCDH-201ENST00000222214 IQSEC3Q9UPP2 1182 aaPredicted RBP20.69■□□□□ 0.9
GCDH-201ENST00000222214 CACNA1SQ13698 1873 aa20.69■□□□□ 0.9
GCDH-201ENST00000222214 SYCE3A1L190 88 aa20.68■□□□□ 0.9
GCDH-201ENST00000222214 DTNBO60941 627 aa20.68■□□□□ 0.9
GCDH-201ENST00000222214 NASPP49321 788 aaPredicted RBP20.68■□□□□ 0.9
GCDH-201ENST00000222214 STAG1Q8WVM7 1258 aa20.68■□□□□ 0.9
GCDH-201ENST00000222214 NCOA5Q9HCD5 579 aaKnown RBP20.68■□□□□ 0.9
GCDH-201ENST00000222214 CFAP45Q9UL16 551 aa20.68■□□□□ 0.9
GCDH-201ENST00000222214 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
GCDH-201ENST00000222214 SH2B2O14492 632 aaPredicted RBP20.68■□□□□ 0.9
GCDH-201ENST00000222214 ST5P78524 1137 aa20.68■□□□□ 0.9
GCDH-201ENST00000222214 MFSD6Q6ZSS7 791 aa20.68■□□□□ 0.9
GCDH-201ENST00000222214 CPLX1O14810 134 aa20.67■□□□□ 0.9
GCDH-201ENST00000222214 GYS1P13807 737 aa20.67■□□□□ 0.9
GCDH-201ENST00000222214 LIFRP42702 1097 aa20.67■□□□□ 0.9
GCDH-201ENST00000222214 SGMS1Q86VZ5 419 aa20.67■□□□□ 0.9
GCDH-201ENST00000222214 PANK2Q9BZ23 570 aa20.67■□□□□ 0.9
GCDH-201ENST00000222214 HPS5Q9UPZ3 1129 aa20.67■□□□□ 0.9
GCDH-201ENST00000222214 B4E1Z4 1266 aa20.66■□□□□ 0.9
GCDH-201ENST00000222214 CDKL5O76039 1030 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms