RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 TRIM28Q13263 835 aaKnown RBP17.81■□□□□ 0.44
TGFB1-201ENST00000221930 ARID5BQ14865 1188 aa17.81■□□□□ 0.44
TGFB1-201ENST00000221930 LRRFIP1Q32MZ4 808 aaKnown RBP17.81■□□□□ 0.44
TGFB1-201ENST00000221930 MB21D2Q8IYB1 491 aaPredicted RBP17.81■□□□□ 0.44
TGFB1-201ENST00000221930 ZBTB38Q8NAP3 1195 aaPredicted RBP17.81■□□□□ 0.44
TGFB1-201ENST00000221930 NKX2-3Q8TAU0 364 aa17.81■□□□□ 0.44
TGFB1-201ENST00000221930 APPBP2Q92624 585 aa17.81■□□□□ 0.44
TGFB1-201ENST00000221930 C8orf76Q96K31 380 aa17.81■□□□□ 0.44
TGFB1-201ENST00000221930 GREM2Q9H772 168 aa17.81■□□□□ 0.44
TGFB1-201ENST00000221930 BTG4Q9NY30 223 aa17.81■□□□□ 0.44
TGFB1-201ENST00000221930 ZNF213O14771 459 aa17.8■□□□□ 0.44
TGFB1-201ENST00000221930 CTAGE5O15320 804 aa17.8■□□□□ 0.44
TGFB1-201ENST00000221930 CHAF1AQ13111 956 aaPredicted RBP17.8■□□□□ 0.44
TGFB1-201ENST00000221930 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
TGFB1-201ENST00000221930 RALYLQ86SE5 291 aaKnown RBP17.8■□□□□ 0.44
TGFB1-201ENST00000221930 PIGBQ92521 554 aa17.8■□□□□ 0.44
TGFB1-201ENST00000221930 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
TGFB1-201ENST00000221930 ITGA6P23229 1130 aa17.8■□□□□ 0.44
TGFB1-201ENST00000221930 EVCP57679 992 aa17.8■□□□□ 0.44
TGFB1-201ENST00000221930 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.8■□□□□ 0.44
TGFB1-201ENST00000221930 SDF4Q9BRK5 362 aa17.8■□□□□ 0.44
TGFB1-201ENST00000221930 CPLX1O14810 134 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 CAVIN2O95810 425 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 CSF1RP07333 972 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 NDUFA8P51970 172 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 SF3A1Q15459 793 aaKnown RBP17.79■□□□□ 0.44
TGFB1-201ENST00000221930 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 SPEF2Q9C093 1822 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 RXRAP19793 462 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 ATL3Q6DD88 541 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 DHX40Q8IX18 779 aaKnown RBP17.79■□□□□ 0.44
TGFB1-201ENST00000221930 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
TGFB1-201ENST00000221930 MYH15Q9Y2K3 1946 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 STK38Q15208 465 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 FMR1NBQ8N0W7 255 aaPredicted RBP17.79■□□□□ 0.44
TGFB1-201ENST00000221930 FBXL16Q8N461 479 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 LINC00301Q8NCQ3 95 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 FBXO18Q8NFZ0 1043 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 RTEL1Q9NZ71 1219 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 FBXO3Q9UK99 471 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 RIPOR2Q9Y4F9 1068 aa17.79■□□□□ 0.44
TGFB1-201ENST00000221930 DOT1LQ8TEK3 1739 aa17.78■□□□□ 0.44
TGFB1-201ENST00000221930 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
TGFB1-201ENST00000221930 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
TGFB1-201ENST00000221930 CNNM1Q9NRU3 951 aa17.78■□□□□ 0.44
TGFB1-201ENST00000221930 IDH1O75874 414 aaKnown RBP17.78■□□□□ 0.44
TGFB1-201ENST00000221930 APPP05067 770 aa17.78■□□□□ 0.44
TGFB1-201ENST00000221930 CBX1P83916 185 aa17.78■□□□□ 0.44
TGFB1-201ENST00000221930 ADALQ6DHV7 355 aa17.78■□□□□ 0.44
TGFB1-201ENST00000221930 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
TGFB1-201ENST00000221930 KIF28PB7ZC32 967 aa17.77■□□□□ 0.44
TGFB1-201ENST00000221930 FILIP1Q7Z7B0 1213 aa17.77■□□□□ 0.44
TGFB1-201ENST00000221930 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
TGFB1-201ENST00000221930 AOPEPQ8N6M6 819 aa17.77■□□□□ 0.44
TGFB1-201ENST00000221930 NBPF3Q9H094 633 aa17.77■□□□□ 0.44
TGFB1-201ENST00000221930 ANO10Q9NW15 660 aa17.77■□□□□ 0.44
TGFB1-201ENST00000221930 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.43
TGFB1-201ENST00000221930 GIGYF2Q6Y7W6 1299 aaKnown RBP17.77■□□□□ 0.43
TGFB1-201ENST00000221930 CGNQ9P2M7 1197 aaKnown RBP17.77■□□□□ 0.43
TGFB1-201ENST00000221930 RIC1Q4ADV7 1423 aa17.76■□□□□ 0.43
TGFB1-201ENST00000221930 STARD3NLO95772 234 aa17.76■□□□□ 0.43
TGFB1-201ENST00000221930 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
TGFB1-201ENST00000221930 PLA2G12BQ9BX93 195 aa17.76■□□□□ 0.43
TGFB1-201ENST00000221930 MYSM1Q5VVJ2 828 aa17.76■□□□□ 0.43
TGFB1-201ENST00000221930 MAP3K15Q6ZN16 1313 aa17.76■□□□□ 0.43
TGFB1-201ENST00000221930 SARM1Q6SZW1 724 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 LRRC8AQ8IWT6 810 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
TGFB1-201ENST00000221930 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.75■□□□□ 0.432e-6■■□□□ 13
TGFB1-201ENST00000221930 SENP2Q9HC62 589 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 PIH1D3Q9NQM4 214 aaKnown RBP17.75■□□□□ 0.43
TGFB1-201ENST00000221930 INCENPQ9NQS7 918 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 SLIT2O94813 1529 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 BIN1O00499 593 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 SPTLC2O15270 562 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 CHMP4CQ96CF2 233 aa17.75■□□□□ 0.43
TGFB1-201ENST00000221930 ZBTB22O15209 634 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 ADD2P35612 726 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 DPCR1Q3MIW9 517 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 MRFAP1L1Q96HT8 127 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
TGFB1-201ENST00000221930 ANKRD18BA2A2Z9 1011 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 IRS4O14654 1257 aaPredicted RBP17.74■□□□□ 0.43
TGFB1-201ENST00000221930 TNNT1P13805 278 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 MARCKSP29966 332 aaPredicted RBP17.74■□□□□ 0.43
TGFB1-201ENST00000221930 PHKA1P46020 1223 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 CTSWP56202 376 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 TRDNQ13061 729 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 TPD52L1Q16890 204 aaPredicted RBP17.74■□□□□ 0.43
TGFB1-201ENST00000221930 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 SNAP23O00161 211 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 EXOC5O00471 708 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 CDC25BP30305 580 aa17.74■□□□□ 0.43
TGFB1-201ENST00000221930 IRX5P78411 483 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms