RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 NTSR2O95665 410 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 SLC9C2Q5TAH2 1124 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
USP11-201ENST00000218348 DDR1Q08345 913 aa11.77□□□□□ -0.52
USP11-201ENST00000218348 USPL1Q5W0Q7 1092 aa11.77□□□□□ -0.52
USP11-201ENST00000218348 TM6SF1Q9BZW5 370 aa11.77□□□□□ -0.52
USP11-201ENST00000218348 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.53
USP11-201ENST00000218348 RXRAP19793 462 aa11.77□□□□□ -0.53
USP11-201ENST00000218348 CAMK4Q16566 473 aa11.77□□□□□ -0.53
USP11-201ENST00000218348 AK7Q96M32 723 aa11.77□□□□□ -0.53
USP11-201ENST00000218348 AKAP2Q9Y2D5 859 aa11.77□□□□□ -0.53
USP11-201ENST00000218348 ZMYM1Q5SVZ6 1142 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 ZSCAN31Q96LW9 406 aaPredicted RBP11.76□□□□□ -0.53
USP11-201ENST00000218348 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
USP11-201ENST00000218348 RIPOR2Q9Y4F9 1068 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 CARMIL3Q8ND23 1372 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 E7EWF7 191 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 H3BQV1 296 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 POLRMTO00411 1230 aaKnown RBP11.76□□□□□ -0.53
USP11-201ENST00000218348 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 FAM184AQ8NB25 1140 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 JAG2Q9Y219 1238 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 ARAP2Q8WZ64 1704 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 C10orf71Q711Q0 1435 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 NPHP1O15259 732 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 TPM2P07951 284 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 CCDC144CPQ8IYA2 1237 aa11.76□□□□□ -0.53
USP11-201ENST00000218348 PIH1D3Q9NQM4 214 aaKnown RBP11.76□□□□□ -0.53
USP11-201ENST00000218348 PDE8AO60658 829 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 CSF1RP07333 972 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 TOMM22Q9NS69 142 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 SNED1Q8TER0 1413 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 CIAO1O76071 339 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 PHF14O94880 888 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 FGAP02671 866 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 BCAMP50895 628 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 SCRN1Q12765 414 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
USP11-201ENST00000218348 GJB4Q9NTQ9 266 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 WWC3Q9ULE0 1092 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 KLRG2A4D1S0 409 aaPredicted RBP11.75□□□□□ -0.53
USP11-201ENST00000218348 GPAA1O43292 621 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 EPB41L2O43491 1005 aaKnown RBP11.75□□□□□ -0.53
USP11-201ENST00000218348 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 HMG20BQ9P0W2 317 aa11.75□□□□□ -0.53
USP11-201ENST00000218348 CDHR2Q9BYE9 1310 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 HMGB2P26583 209 aaKnown RBP11.74□□□□□ -0.53
USP11-201ENST00000218348 NFIXQ14938 502 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 MIGA1Q8NAN2 632 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 NKX2-3Q8TAU0 364 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 KCNB2Q92953 911 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 UTP14AQ9BVJ6 771 aaKnown RBP11.74□□□□□ -0.53
USP11-201ENST00000218348 ABCF2Q9UG63 623 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 PDE8BO95263 885 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 PTGER2P43116 358 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 SLC51AQ86UW1 340 aa11.74□□□□□ -0.53
USP11-201ENST00000218348 MBD3O95983 291 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 KRT32Q14532 448 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 RRP12Q5JTH9 1297 aaKnown RBP11.73□□□□□ -0.53
USP11-201ENST00000218348 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 HELLSQ9NRZ9 838 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
USP11-201ENST00000218348 ANKRD1Q15327 319 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 SLC4A8Q2Y0W8 1093 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
USP11-201ENST00000218348 IL17RAQ96F46 866 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 GOLGA6L4A6NEF3 574 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 SOCS7O14512 581 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 SLC10A5Q5PT55 438 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 CACNA1SQ13698 1873 aa11.73□□□□□ -0.53
USP11-201ENST00000218348 DMTNQ08495 405 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 TTC6Q86TZ1 520 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 MAGEB6Q8N7X4 407 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 ZNF445P59923 1031 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 ERFEQ4G0M1 354 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 LRSAM1Q6UWE0 723 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 CKAP2LQ8IYA6 745 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 GTF3C6Q969F1 213 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 RTL9Q8NET4 1388 aa11.72□□□□□ -0.53
USP11-201ENST00000218348 FOXP2O15409 715 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 PRKAB2O43741 272 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 GYG1P46976 350 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 RALYLQ86SE5 291 aaKnown RBP11.71□□□□□ -0.53
USP11-201ENST00000218348 MYL10Q9BUA6 226 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 ARMT1Q9H993 441 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 STK32BQ9NY57 414 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 CGNQ9P2M7 1197 aaKnown RBP11.71□□□□□ -0.53
USP11-201ENST00000218348 ZNF213O14771 459 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms