RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 NCOA7Q8NI08 942 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 ARMT1Q9H993 441 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 MTMR6Q9Y217 621 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 TIAM2Q8IVF5 1701 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 APPP05067 770 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 IFNL3Q8IZI9 196 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 LCORLQ8N3X6 602 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 ABCF2Q9UG63 623 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 LEMD3Q9Y2U8 911 aa21.98■■□□□ 1.11
CTSA-201ENST00000191018 ANKRD31Q8N7Z5 1873 aa21.97■■□□□ 1.11
CTSA-201ENST00000191018 GSG1L2A8MUP6 293 aa21.97■■□□□ 1.11
CTSA-201ENST00000191018 MCM5P33992 734 aa21.97■■□□□ 1.11
CTSA-201ENST00000191018 TBC1D10CQ8IV04 446 aa21.97■■□□□ 1.11
CTSA-201ENST00000191018 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
CTSA-201ENST00000191018 TFCP2L1Q9NZI6 479 aa21.97■■□□□ 1.11
CTSA-201ENST00000191018 MAST2Q6P0Q8 1798 aa21.97■■□□□ 1.11
CTSA-201ENST00000191018 KLRG2A4D1S0 409 aaPredicted RBP21.96■■□□□ 1.11
CTSA-201ENST00000191018 DTNBO60941 627 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 F13A1P00488 732 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 APOBRQ0VD83 1088 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 SCRN1Q12765 414 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 CHST3Q7LGC8 479 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 ADGRA1Q86SQ6 560 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 TXNRD3Q86VQ6 643 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 ZNF274Q96GC6 653 aaPredicted RBP21.96■■□□□ 1.11
CTSA-201ENST00000191018 XDHP47989 1333 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 CYP7A1P22680 504 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 HOXA10P31260 410 aaPredicted RBP21.96■■□□□ 1.11
CTSA-201ENST00000191018 ANTXR2P58335 489 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 RAI14Q9P0K7 980 aa21.96■■□□□ 1.11
CTSA-201ENST00000191018 CCDC88AQ3V6T2 1871 aa21.95■■□□□ 1.11
CTSA-201ENST00000191018 PRPF40AO75400 957 aaKnown RBP21.95■■□□□ 1.1
CTSA-201ENST00000191018 PDCP20941 246 aa21.95■■□□□ 1.1
CTSA-201ENST00000191018 RALYLQ86SE5 291 aaKnown RBP21.95■■□□□ 1.1
CTSA-201ENST00000191018 LLPHQ9BRT6 129 aaKnown RBP21.95■■□□□ 1.1
CTSA-201ENST00000191018 GZF1Q9H116 711 aaPredicted RBP21.95■■□□□ 1.1
CTSA-201ENST00000191018 DDX49Q9Y6V7 483 aaKnown RBP21.95■■□□□ 1.1
CTSA-201ENST00000191018 KIAA1551Q9HCM1 1747 aa21.95■■□□□ 1.1
CTSA-201ENST00000191018 LRRC37AA6NMS7 1700 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 PRC1O43663 620 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 C15orf52Q6ZUT6 534 aaKnown RBP21.94■■□□□ 1.1
CTSA-201ENST00000191018 SLC51AQ86UW1 340 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 COL23A1Q86Y22 540 aaPredicted RBP21.94■■□□□ 1.1
CTSA-201ENST00000191018 SMARCC2Q8TAQ2 1214 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 ZNF384Q8TF68 577 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 RBM17Q96I25 401 aaKnown RBP21.94■■□□□ 1.1
CTSA-201ENST00000191018 NAPBQ9H115 298 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 PRKAB2O43741 272 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 PDIA3P30101 505 aaKnown RBP21.94■■□□□ 1.1
CTSA-201ENST00000191018 LARP1BQ659C4 914 aaKnown RBP21.94■■□□□ 1.1
CTSA-201ENST00000191018 NLGN1Q8N2Q7 840 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 ANKIB1Q9P2G1 1089 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 SLC4A4Q9Y6R1 1079 aa21.94■■□□□ 1.1
CTSA-201ENST00000191018 TRDNQ13061 729 aa21.93■■□□□ 1.1
CTSA-201ENST00000191018 MIGA1Q8NAN2 632 aa21.93■■□□□ 1.1
CTSA-201ENST00000191018 RIOK1Q9BRS2 568 aaKnown RBP21.93■■□□□ 1.1
CTSA-201ENST00000191018 JAK2O60674 1132 aa21.92■■□□□ 1.1
CTSA-201ENST00000191018 FLAD1Q8NFF5 587 aa21.92■■□□□ 1.1
CTSA-201ENST00000191018 CRAMP1Q96RY5 1269 aa21.92■■□□□ 1.1
CTSA-201ENST00000191018 NACAP1Q9BZK3 213 aa21.92■■□□□ 1.1
CTSA-201ENST00000191018 RGS17Q9UGC6 210 aaPredicted RBP21.92■■□□□ 1.1
CTSA-201ENST00000191018 ATP6V1DQ9Y5K8 247 aa21.92■■□□□ 1.1
CTSA-201ENST00000191018 LTBP1Q14766 1721 aa21.92■■□□□ 1.1
CTSA-201ENST00000191018 MAGEB6P1A0A0J9YX57 407 aa21.92■■□□□ 1.1
CTSA-201ENST00000191018 TMED8Q6PL24 325 aaPredicted RBP21.92■■□□□ 1.1
CTSA-201ENST00000191018 NSUN7Q8NE18 718 aaKnown RBP21.92■■□□□ 1.1
CTSA-201ENST00000191018 NSUN4Q96CB9 384 aaKnown RBP21.92■■□□□ 1.1
CTSA-201ENST00000191018 GPHNQ9NQX3 736 aaPredicted RBP21.92■■□□□ 1.1
CTSA-201ENST00000191018 BBOX1O75936 387 aa21.91■■□□□ 1.1
CTSA-201ENST00000191018 NAA16Q6N069 864 aaPredicted RBP21.91■■□□□ 1.1
CTSA-201ENST00000191018 TMEM87AQ8NBN3 555 aa21.91■■□□□ 1.1
CTSA-201ENST00000191018 NKX2-3Q8TAU0 364 aa21.91■■□□□ 1.1
CTSA-201ENST00000191018 VPS37CA5D8V6 355 aaPredicted RBP21.9■■□□□ 1.1
CTSA-201ENST00000191018 CTDNEP1O95476 244 aa21.9■■□□□ 1.1
CTSA-201ENST00000191018 GPSM2P81274 684 aa21.9■■□□□ 1.1
CTSA-201ENST00000191018 GPT2Q8TD30 523 aa21.9■■□□□ 1.1
CTSA-201ENST00000191018 CHMP4CQ96CF2 233 aa21.9■■□□□ 1.1
CTSA-201ENST00000191018 IGSF3O75054 1194 aa21.9■■□□□ 1.1
CTSA-201ENST00000191018 CYB5R4Q7L1T6 521 aa21.9■■□□□ 1.1
CTSA-201ENST00000191018 TDRD7Q8NHU6 1098 aaKnown RBP21.9■■□□□ 1.1
CTSA-201ENST00000191018 NEDD4P46934 1319 aa21.89■■□□□ 1.1
CTSA-201ENST00000191018 SALL1Q9NSC2 1324 aa21.89■■□□□ 1.1
CTSA-201ENST00000191018 FSD2A1L4K1 749 aa21.89■■□□□ 1.09
CTSA-201ENST00000191018 TDO2P48775 406 aa21.89■■□□□ 1.09
CTSA-201ENST00000191018 MECOMQ03112 1051 aa21.89■■□□□ 1.09
CTSA-201ENST00000191018 CDC37L1Q7L3B6 337 aa21.89■■□□□ 1.09
CTSA-201ENST00000191018 BRPF3Q9ULD4 1205 aa21.89■■□□□ 1.09
CTSA-201ENST00000191018 CCT2P78371 535 aaKnown RBP21.88■■□□□ 1.09
CTSA-201ENST00000191018 FOXD4L6Q3SYB3 417 aaPredicted RBP21.88■■□□□ 1.09
CTSA-201ENST00000191018 AKNAD1Q5T1N1 836 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 FOXD4L3Q6VB84 417 aaPredicted RBP21.88■■□□□ 1.09
CTSA-201ENST00000191018 STAG1Q8WVM7 1258 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 BRIP1Q9BX63 1249 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 PODXL2Q9NZ53 605 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 TACC3Q9Y6A5 838 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 B4E1Z4 1266 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 ATP2B4P23634 1241 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 PRDX5P30044 214 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 HMGN5P82970 282 aaKnown RBP21.88■■□□□ 1.09
CTSA-201ENST00000191018 CTDSPL2Q05D32 466 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms