RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 ZNF589Q86UQ0 364 aaPredicted RBP17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 FAN1Q9Y2M0 1017 aa17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 MEGF6O75095 1541 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 PHKG2P15735 406 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 BRD3Q15059 726 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 IFNKQ9P0W0 207 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 A0A087WUV0 522 aaPredicted RBP17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 CHGBP05060 677 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 TDO2P48775 406 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 MAP3K9P80192 1104 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
TMEM38A-201ENST00000187762 CCDC196A0A1B0GTZ2 297 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 AFDNP55196 1824 aaKnown RBP17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 MCM6Q14566 821 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 MICALL1Q8N3F8 863 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 TXLNAP40222 546 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 GOLGA1Q92805 767 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 NAT10Q9H0A0 1025 aaKnown RBP17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 MRFAP1Q9Y605 127 aa17.09■□□□□ 0.33
TMEM38A-201ENST00000187762 MED23Q9ULK4 1368 aa17.08■□□□□ 0.32
TMEM38A-201ENST00000187762 HIP1O00291 1037 aa17.08■□□□□ 0.32
TMEM38A-201ENST00000187762 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.32
TMEM38A-201ENST00000187762 FBXW7Q969H0 707 aa17.08■□□□□ 0.32
TMEM38A-201ENST00000187762 ALS2Q96Q42 1657 aa17.08■□□□□ 0.32
TMEM38A-201ENST00000187762 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 CCAR1Q8IX12 1150 aaKnown RBP17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 PLEKHA4Q9H4M7 779 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 PPFIA4O75335 1185 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 BEND6Q5SZJ8 279 aaPredicted RBP17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 HDXQ7Z353 690 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
TMEM38A-201ENST00000187762 CCDC189A1A4V9 331 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 VWA3AA6NCI4 1184 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 TFCP2Q12800 502 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 RESTQ13127 1097 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 STK3Q13188 491 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 BLOC1S2Q6QNY1 142 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 LRP10Q7Z4F1 713 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 CEP120Q8N960 986 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 FAM212AQ96EL1 285 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 KIF1AQ12756 1690 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 MRC1P22897 1456 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 PATL2C9JE40 543 aaKnown RBP17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 EGFL6Q8IUX8 553 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 HNRNPLLQ8WVV9 542 aaKnown RBP17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 KAT2BQ92831 832 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 WDR24Q96S15 920 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 COL15A1P39059 1388 aa17.06■□□□□ 0.32
TMEM38A-201ENST00000187762 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 MNAT1P51948 309 aa17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 EIF5P55010 431 aaKnown RBP17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 PSMA5P28066 241 aa17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 RFX5P48382 616 aaPredicted RBP17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 PTPN12Q05209 780 aaKnown RBP17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 TOB2Q14106 344 aaPredicted RBP17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 CCDC73Q6ZRK6 1079 aa17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 ERCC4Q92889 916 aaPredicted RBP17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
TMEM38A-201ENST00000187762 CYP27B1O15528 508 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 SEC62Q99442 399 aaKnown RBP17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 ZSCAN12O43309 604 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 GNG11P61952 73 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 CEBPZQ03701 1054 aaKnown RBP17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 TNNI3KQ59H18 835 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 FPGT-TNNI3KV9GXZ4 949 aa17.04■□□□□ 0.32
TMEM38A-201ENST00000187762 TAF5LO75529 589 aa17.03■□□□□ 0.32
TMEM38A-201ENST00000187762 ERLIN2O94905 339 aa17.03■□□□□ 0.32
TMEM38A-201ENST00000187762 RPAINQ86UA6 219 aa17.03■□□□□ 0.32
TMEM38A-201ENST00000187762 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
TMEM38A-201ENST00000187762 FCHSD1Q86WN1 690 aa17.03■□□□□ 0.32
TMEM38A-201ENST00000187762 FAM71BQ8TC56 605 aa17.03■□□□□ 0.32
TMEM38A-201ENST00000187762 DBNDD2Q9BQY9 259 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms