RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 AOPEPQ8N6M6 819 aa26.27■■□□□ 1.8
TARBP1-201ENST00000040877 CHST3Q7LGC8 479 aa26.26■■□□□ 1.79
TARBP1-201ENST00000040877 LGR6Q9HBX8 967 aa26.26■■□□□ 1.79
TARBP1-201ENST00000040877 USP19O94966 1318 aa26.26■■□□□ 1.79
TARBP1-201ENST00000040877 GCKRQ14397 625 aa26.26■■□□□ 1.79
TARBP1-201ENST00000040877 PPP2R5BQ15173 497 aa26.26■■□□□ 1.79
TARBP1-201ENST00000040877 FAM13AO94988 1023 aa26.26■■□□□ 1.79
TARBP1-201ENST00000040877 SLAIN2Q9P270 581 aa26.26■■□□□ 1.79
TARBP1-201ENST00000040877 DBNDD2Q9BQY9 259 aa26.25■■□□□ 1.79
TARBP1-201ENST00000040877 KAT6BQ8WYB5 2073 aa26.25■■□□□ 1.79
TARBP1-201ENST00000040877 MROH5Q6ZUA9 1318 aa26.25■■□□□ 1.79
TARBP1-201ENST00000040877 FMNL3Q8IVF7 1028 aa26.25■■□□□ 1.79
TARBP1-201ENST00000040877 DEXIO95424 95 aa26.25■■□□□ 1.79
TARBP1-201ENST00000040877 SKILP12757 684 aa26.25■■□□□ 1.79
TARBP1-201ENST00000040877 DNAJC25Q9H1X3 360 aa26.25■■□□□ 1.79
TARBP1-201ENST00000040877 CLCN1P35523 988 aa26.24■■□□□ 1.79
TARBP1-201ENST00000040877 TYRO3Q06418 890 aa26.24■■□□□ 1.79
TARBP1-201ENST00000040877 NCBP1Q09161 790 aaKnown RBP26.24■■□□□ 1.79
TARBP1-201ENST00000040877 KIAA0753Q2KHM9 967 aa26.24■■□□□ 1.79
TARBP1-201ENST00000040877 KRT83P78385 493 aa26.24■■□□□ 1.79
TARBP1-201ENST00000040877 KBTBD3Q8NAB2 608 aa26.24■■□□□ 1.79
TARBP1-201ENST00000040877 BBXQ8WY36 941 aaPredicted RBP26.24■■□□□ 1.79
TARBP1-201ENST00000040877 CLEC11AQ9Y240 323 aa26.24■■□□□ 1.79
TARBP1-201ENST00000040877 LMBR1Q8WVP7 490 aa26.23■■□□□ 1.79
TARBP1-201ENST00000040877 EIF4A1P60842 406 aaKnown RBP26.23■■□□□ 1.79
TARBP1-201ENST00000040877 ZHX1Q9UKY1 873 aaPredicted RBP26.23■■□□□ 1.79
TARBP1-201ENST00000040877 LMOD1P29536 600 aaPredicted RBP26.23■■□□□ 1.79
TARBP1-201ENST00000040877 SELENOOQ9BVL4 669 aa26.22■■□□□ 1.79
TARBP1-201ENST00000040877 SYNCQ9H7C4 482 aa26.22■■□□□ 1.79
TARBP1-201ENST00000040877 MCM7P33993 719 aa26.22■■□□□ 1.79
TARBP1-201ENST00000040877 TACC1O75410 805 aa26.22■■□□□ 1.79
TARBP1-201ENST00000040877 MMRN2Q9H8L6 949 aa26.22■■□□□ 1.79
TARBP1-201ENST00000040877 PLCD1P51178 756 aa26.22■■□□□ 1.79
TARBP1-201ENST00000040877 ANGEL1Q9UNK9 670 aaKnown RBP26.22■■□□□ 1.79
TARBP1-201ENST00000040877 FSD2A1L4K1 749 aa26.21■■□□□ 1.79
TARBP1-201ENST00000040877 A1BGP04217 495 aa26.21■■□□□ 1.79
TARBP1-201ENST00000040877 PRIM1P49642 420 aaKnown RBP26.21■■□□□ 1.79
TARBP1-201ENST00000040877 TCHPQ9BT92 498 aa26.21■■□□□ 1.79
TARBP1-201ENST00000040877 SLC27A2O14975 620 aa26.21■■□□□ 1.79
TARBP1-201ENST00000040877 SYT1P21579 422 aa26.21■■□□□ 1.79
TARBP1-201ENST00000040877 ELP1O95163 1332 aa26.21■■□□□ 1.79
TARBP1-201ENST00000040877 SUPT20HQ8NEM7 779 aa26.21■■□□□ 1.79
TARBP1-201ENST00000040877 DYNC1I1O14576 645 aa26.2■■□□□ 1.79
TARBP1-201ENST00000040877 MICALCLQ6ZW33 695 aa26.2■■□□□ 1.79
TARBP1-201ENST00000040877 SUCLG2Q96I99 432 aa26.2■■□□□ 1.79
TARBP1-201ENST00000040877 CCDC186Q7Z3E2 898 aa26.2■■□□□ 1.78
TARBP1-201ENST00000040877 HOOK2Q96ED9 719 aa26.2■■□□□ 1.78
TARBP1-201ENST00000040877 SGSM2O43147 1006 aa26.2■■□□□ 1.78
TARBP1-201ENST00000040877 RPL13P26373 211 aaKnown RBP26.2■■□□□ 1.78
TARBP1-201ENST00000040877 CALCOCO1Q9P1Z2 691 aa26.2■■□□□ 1.78
TARBP1-201ENST00000040877 ADGBQ8N7X0 1667 aa26.2■■□□□ 1.78
TARBP1-201ENST00000040877 DNAJC10Q8IXB1 793 aa26.2■■□□□ 1.78
TARBP1-201ENST00000040877 ZNF496Q96IT1 587 aaPredicted RBP26.2■■□□□ 1.78
TARBP1-201ENST00000040877 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 GPAA1O43292 621 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 CCDC175P0C221 793 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 ARHGEF10LQ9HCE6 1279 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 INCENPQ9NQS7 918 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 PLS1Q14651 629 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 SRRTQ9BXP5 876 aaKnown RBP26.19■■□□□ 1.78
TARBP1-201ENST00000040877 RBM26Q5T8P6 1007 aaKnown RBP26.19■■□□□ 1.78
TARBP1-201ENST00000040877 TUBB4BP68371 445 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 TMX1Q9H3N1 280 aa26.19■■□□□ 1.78
TARBP1-201ENST00000040877 IBTKQ9P2D0 1353 aaPredicted RBP26.19■■□□□ 1.78
TARBP1-201ENST00000040877 B4E1Z4 1266 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 LRRC45Q96CN5 670 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 KRT86O43790 486 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 BLMP54132 1417 aaPredicted RBP26.18■■□□□ 1.78
TARBP1-201ENST00000040877 CTAGE15A4D2H0 777 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 CTAGE8P0CG41 777 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 CTAGE6Q86UF2 777 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 CTAGE4Q8IX94 777 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 TBC1D22AQ8WUA7 517 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 STK24Q9Y6E0 443 aa26.18■■□□□ 1.78
TARBP1-201ENST00000040877 KIF4AO95239 1232 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 CCDC65Q8IXS2 484 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 PDE6BP35913 854 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 FAM160A1Q05DH4 1040 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 CTR9Q6PD62 1173 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 NEK11Q8NG66 645 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 FAM107BQ9H098 131 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 ARMT1Q9H993 441 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 KIF5AQ12840 1032 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 BMS1Q14692 1282 aaKnown RBP26.17■■□□□ 1.78
TARBP1-201ENST00000040877 PLCD4Q9BRC7 762 aa26.17■■□□□ 1.78
TARBP1-201ENST00000040877 CCDC42Q96M95 316 aa26.16■■□□□ 1.78
TARBP1-201ENST00000040877 BCCIPQ9P287 314 aaKnown RBP eCLIP26.16■■□□□ 1.78
TARBP1-201ENST00000040877 SV2BQ7L1I2 683 aa26.16■■□□□ 1.78
TARBP1-201ENST00000040877 LZTS2Q9BRK4 669 aa26.16■■□□□ 1.78
TARBP1-201ENST00000040877 RASAL2Q9UJF2 1139 aa26.16■■□□□ 1.78
TARBP1-201ENST00000040877 TCIRG1Q13488 830 aa26.15■■□□□ 1.78
TARBP1-201ENST00000040877 MSANTD4Q8NCY6 345 aa26.15■■□□□ 1.78
TARBP1-201ENST00000040877 STAMBPO95630 424 aa26.15■■□□□ 1.78
TARBP1-201ENST00000040877 DPP8Q6V1X1 898 aaPredicted RBP26.15■■□□□ 1.78
TARBP1-201ENST00000040877 XRCC6P12956 609 aaKnown RBP eCLIP26.15■■□□□ 1.78
TARBP1-201ENST00000040877 RXRAP19793 462 aa26.15■■□□□ 1.78
TARBP1-201ENST00000040877 MRVI1Q9Y6F6 885 aa26.15■■□□□ 1.78
TARBP1-201ENST00000040877 ZKSCAN3Q9BRR0 538 aa26.14■■□□□ 1.78
TARBP1-201ENST00000040877 H0YIN7 160 aa26.14■■□□□ 1.78
TARBP1-201ENST00000040877 APBB1IPQ7Z5R6 666 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms