RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 BICDL1Q6ZP65 573 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 IFIT3O14879 490 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 LIG1P18858 919 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 FAM227BQ96M60 508 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 COL18A1P39060 1754 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 AOX1Q06278 1338 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 KLF18A0A0U1RQI7 1052 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 MPHOSPH10O00566 681 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 EZRP15311 586 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 BARGINQ6ZT62 677 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 TAX1BP1Q86VP1 789 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 SLC12A7Q9Y666 1083 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 HOXB7P09629 217 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 TOP1P11387 765 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 MAP9Q49MG5 647 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 KLHL10Q6JEL2 608 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 CHST3Q7LGC8 479 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 TMC6Q7Z403 805 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 SSH3Q8TE77 659 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 CYP27B1O15528 508 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 GSDMDP57764 484 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 LUZP1Q86V48 1076 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 ZNF622Q969S3 477 aaKnown RBP eCLIP13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 LMO7Q8WWI1 1683 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 LRCH2Q5VUJ6 765 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
TSPAN9-201ENST00000011898 TFCP2Q12800 502 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 MAGEC2Q9UBF1 373 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 MYO6Q9UM54 1294 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 CCDC196A0A1B0GTZ2 297 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 ANKRD18BA2A2Z9 1011 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 IL15P40933 162 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 E2F4Q16254 413 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 ERO1AQ96HE7 468 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 PAG1Q9NWQ8 432 aa13.89□□□□□ -0.19
TSPAN9-201ENST00000011898 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 NEBLO76041 1014 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 OTUD6BQ8N6M0 293 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 PARP4Q9UKK3 1724 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 A0A1B0GUA9 196 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 KIF5CO60282 957 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 APOBRQ0VD83 1088 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 SLIT2O94813 1529 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 EPB41L2O43491 1005 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
TSPAN9-201ENST00000011898 SLC27A2O14975 620 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 KIAA1328Q86T90 577 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 GPT2Q8TD30 523 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 TIMM10P62072 90 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 RPAINQ86UA6 219 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 GJD4Q96KN9 370 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 ZNHIT6Q9NWK9 470 aaKnown RBP13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 CCDC12Q8WUD4 166 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 OSBPL3Q9H4L5 887 aa13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-201ENST00000011898 ZFYP08048 801 aaPredicted RBP13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 PAIP2Q9BPZ3 127 aaKnown RBP13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 CEMIPQ8WUJ3 1361 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 STIM1Q13586 685 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 RBM28Q9NW13 759 aaKnown RBP13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 PTPDC1A2A3K4 754 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 CCDC102BQ68D86 513 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 CNPY4Q8N129 248 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 KCNQ3O43525 872 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 SYKP43405 635 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 PPP2R5AQ15172 486 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 AOPEPQ8N6M6 819 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 SUCLG2Q96I99 432 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 SCLT1Q96NL6 688 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 DBNDD2Q9BQY9 259 aa13.86□□□□□ -0.19
TSPAN9-201ENST00000011898 CCDC129Q6ZRS4 1044 aa13.85□□□□□ -0.19
TSPAN9-201ENST00000011898 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
TSPAN9-201ENST00000011898 RANBP6O60518 1105 aaKnown RBP13.85□□□□□ -0.19
TSPAN9-201ENST00000011898 MARCKSP29966 332 aaPredicted RBP13.85□□□□□ -0.19
TSPAN9-201ENST00000011898 CDK5RAP3Q96JB5 506 aa13.85□□□□□ -0.19
TSPAN9-201ENST00000011898 TTF1Q15361 905 aaPredicted RBP13.85□□□□□ -0.19
TSPAN9-201ENST00000011898 ATP2B3Q16720 1220 aa13.85□□□□□ -0.19
TSPAN9-201ENST00000011898 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms