RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 PDE6AP16499 860 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 MCMDC2Q4G0Z9 681 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 AK9Q5TCS8 1911 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 CPA1P15085 419 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 HAND2P61296 217 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 DENND2AQ9ULE3 1009 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 TTF1Q15361 905 aaPredicted RBP12.54□□□□□ -0.4
CD4-201ENST00000011653 GRIK5Q16478 980 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 ARMT1Q9H993 441 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 ZNF277Q9NRM2 450 aaPredicted RBP12.54□□□□□ -0.4
CD4-201ENST00000011653 MAST3O60307 1309 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 STYK1Q6J9G0 422 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
CD4-201ENST00000011653 CASZ1Q86V15 1759 aa12.54□□□□□ -0.4
CD4-201ENST00000011653 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
CD4-201ENST00000011653 MCCP23508 829 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 TTLL5Q6EMB2 1281 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 DZIP1Q86YF9 867 aaKnown RBP12.53□□□□□ -0.4
CD4-201ENST00000011653 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
CD4-201ENST00000011653 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 GPAA1O43292 621 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 LSG1Q9H089 658 aaKnown RBP12.53□□□□□ -0.4
CD4-201ENST00000011653 SPON1Q9HCB6 807 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 MBD4O95243 580 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 ZNF445P59923 1031 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 MFSD14BQ5SR56 506 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
CD4-201ENST00000011653 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
CD4-201ENST00000011653 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.4
CD4-201ENST00000011653 PRKAB2O43741 272 aa12.52□□□□□ -0.4
CD4-201ENST00000011653 DTNBO60941 627 aa12.52□□□□□ -0.4
CD4-201ENST00000011653 KCNA3P22001 575 aa12.52□□□□□ -0.4
CD4-201ENST00000011653 ADD2P35612 726 aa12.52□□□□□ -0.4
CD4-201ENST00000011653 DYNLL1P63167 89 aaKnown RBP12.52□□□□□ -0.4
CD4-201ENST00000011653 ZMYM1Q5SVZ6 1142 aa12.52□□□□□ -0.4
CD4-201ENST00000011653 CAVIN1Q6NZI2 390 aaKnown RBP12.52□□□□□ -0.4
CD4-201ENST00000011653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.4
CD4-201ENST00000011653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.4
CD4-201ENST00000011653 LMBRD1Q9NUN5 540 aa12.52□□□□□ -0.4
CD4-201ENST00000011653 SLX4Q8IY92 1834 aa12.52□□□□□ -0.41
CD4-201ENST00000011653 LRRFIP1Q32MZ4 808 aaKnown RBP12.52□□□□□ -0.41
CD4-201ENST00000011653 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
CD4-201ENST00000011653 ADGRA1Q86SQ6 560 aa12.52□□□□□ -0.41
CD4-201ENST00000011653 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
CD4-201ENST00000011653 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
CD4-201ENST00000011653 APPBP2Q92624 585 aa12.52□□□□□ -0.41
CD4-201ENST00000011653 AATFQ9NY61 560 aaKnown RBP eCLIP12.52□□□□□ -0.41
CD4-201ENST00000011653 PTGER2P43116 358 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 SCNN1DP51172 638 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 ZGPATQ8N5A5 531 aaKnown RBP12.51□□□□□ -0.41
CD4-201ENST00000011653 COL1A1P02452 1464 aaPredicted RBP12.51□□□□□ -0.41
CD4-201ENST00000011653 LRP5O75197 1615 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 NEK4P51957 841 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 MECOMQ03112 1051 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 PKP1Q13835 747 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 SDR42E1Q8WUS8 393 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 RAD17O75943 681 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 LDHBP07195 334 aaKnown RBP12.51□□□□□ -0.41
CD4-201ENST00000011653 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
CD4-201ENST00000011653 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
CD4-201ENST00000011653 MYO5AQ9Y4I1 1855 aaKnown RBP12.5□□□□□ -0.41
CD4-201ENST00000011653 ZSCAN23Q3MJ62 389 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 TMC4Q7Z404 712 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
CD4-201ENST00000011653 ZNF512BQ96KM6 892 aaPredicted RBP12.5□□□□□ -0.41
CD4-201ENST00000011653 RAD50Q92878 1312 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 COL11A2P13942 1736 aaPredicted RBP12.5□□□□□ -0.41
CD4-201ENST00000011653 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
CD4-201ENST00000011653 MCM2P49736 904 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
CD4-201ENST00000011653 JAKMIP1Q96N16 626 aaKnown RBP12.5□□□□□ -0.41
CD4-201ENST00000011653 EYA3Q99504 573 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 TOMM22Q9NS69 142 aa12.5□□□□□ -0.41
CD4-201ENST00000011653 ZFYP08048 801 aaPredicted RBP12.49□□□□□ -0.41
CD4-201ENST00000011653 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
CD4-201ENST00000011653 ADCK5Q3MIX3 580 aa12.49□□□□□ -0.41
CD4-201ENST00000011653 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
CD4-201ENST00000011653 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
CD4-201ENST00000011653 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
CD4-201ENST00000011653 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
CD4-201ENST00000011653 HELLSQ9NRZ9 838 aa12.49□□□□□ -0.41
CD4-201ENST00000011653 SLC4A4Q9Y6R1 1079 aa12.49□□□□□ -0.41
CD4-201ENST00000011653 C10orf71Q711Q0 1435 aa12.49□□□□□ -0.41
CD4-201ENST00000011653 ECE2O60344 883 aa12.48□□□□□ -0.41
CD4-201ENST00000011653 ZKSCAN1P17029 563 aaPredicted RBP12.48□□□□□ -0.41
CD4-201ENST00000011653 CASTP20810 708 aaKnown RBP12.48□□□□□ -0.41
CD4-201ENST00000011653 CHST3Q7LGC8 479 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms