RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Cep120Q7TSG1 988 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Ranbp6Q8BIV3 1105 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Tpcn2Q8BWC0 731 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Myo1bP46735 1107 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Rad23bP54728 416 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Stn1Q8K2X3 378 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Mrpl50Q8VDT9 159 aaKnown RBP15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Xrcc4Q924T3 326 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Akt1s1Q9D1F4 257 aa15.45■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Drc7Q6V3W6 876 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Kiaa0319lQ8K135 1048 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 SelenooQ9DBC0 667 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 FliiQ9JJ28 1271 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Prdm11A2AGX3 565 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Atg9aQ68FE2 551 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Ccdc150Q8CDI7 1110 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Setdb1O88974 1307 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Gm30191A0A0U1RNT7 187 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 MeiocA2AG06 965 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Sept1P42209 366 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Slc4a8Q8JZR6 1089 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Osbpl5Q9ER64 874 aa15.44■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Acap3Q6NXL5 833 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Fnbp4Q6ZQ03 1031 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Mroh6V9GX81 722 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Tpm3P21107 285 aaKnown RBP15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Igf2bp2Q5SF07 592 aaKnown RBP15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Tpm4Q6IRU2 248 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Q8C6G1 249 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Ccdc43Q9CR29 222 aaKnown RBP15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Dynll1P63168 89 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Tmx3Q8BXZ1 456 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Kcnq3Q8K3F6 873 aa15.43■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Api5O35841 504 aaKnown RBP15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Stat5bP42232 786 aa15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Sptlc2P97363 560 aaKnown RBP15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Efcc1Q9JJF6 558 aa15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Slc38a10Q5I012 1090 aa15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 TrhQ62361 256 aa15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Ift122Q6NWV3 1182 aa15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Ampd3O08739 766 aa15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Rbm15bQ6PHZ5 887 aaKnown RBP15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Nxf7Q80SZ6 620 aaKnown RBP15.42■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Atp10bB1AWN4 1474 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Nfil3O08750 462 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Mb21d2Q8C525 428 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Znf704Q9ERQ3 566 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Col16a1Q8BLX7 1580 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Lipo1J3QME6 396 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Leo1Q5XJE5 667 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Luzp1Q8R4U7 1068 aaKnown RBP15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Ubac1Q8VDI7 409 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Sos2Q02384 1333 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 A0A0U1RNP2 1173 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Cfap73J3QPZ5 306 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Dapk3O54784 448 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Fez1Q8K0X8 392 aa15.41■□□□□ 0.06
Clcn3-204ENSMUST00000110301 VrtnQ3SYK4 740 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Atp1a3Q6PIC6 1013 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Nop14Q8R3N1 860 aaKnown RBP15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Foxo4Q9WVH3 505 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Pnpla7A2AJ88 1352 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Zkscan7E9PVW1 718 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Tlr8P58682 1032 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Atp2b4Q6Q477 1205 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Kcnj14Q8JZN3 434 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Phf14Q9D4H9 881 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Acot9Q9R0X4 439 aaKnown RBP15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Arhgap33Q80YF9 1305 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 1700006A11RikB9EHI3 544 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 EngaseQ8BX80 734 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Tango6Q8C3S2 1079 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Atad2Q8CDM1 1040 aa15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 SrrtQ99MR6 875 aaKnown RBP15.4■□□□□ 0.06
Clcn3-204ENSMUST00000110301 Cyp26a1O55127 497 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Adcy5P84309 1262 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Uba5Q8VE47 403 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Stag1Q9D3E6 1258 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Pde3aQ9Z0X4 1141 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Msh6P54276 1358 aaKnown RBP15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Usp42B2RQC2 1324 aaKnown RBP15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ktn1Q61595 1327 aaKnown RBP15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Tbc1d4Q8BYJ6 1307 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Pde11aP0C1Q2 933 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Txndc16Q7TN22 820 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Znf526Q8BI66 675 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Cdan1Q8CC12 1239 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Chd1lQ9CXF7 900 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Slc4a1P04919 929 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Usp25P57080 1055 aa15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ccar2Q8VDP4 922 aaKnown RBP15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ipo7Q9EPL8 1038 aaKnown RBP15.39■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Lrit1Q8K099 624 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 McamQ8R2Y2 648 aaKnown RBP15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Tubgcp6G5E8P0 1769 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Krt23Q99PS0 422 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Elmsan1E9Q2I4 1089 aaKnown RBP15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Il4rP16382 810 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Wdr93Q402B2 695 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Dph6Q9CQ28 267 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms