RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Slc1a4O35874 532 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ppp4r3bQ922R5 820 aa13.31□□□□□ -0.28
Vps54-202ENSMUST00000109578 AbraQ8BUZ1 375 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ppil4Q9CXG3 492 aaKnown RBP13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Odf2lQ9D478 642 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Zbtb43Q9DAI4 467 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Zfp142G5E869 1843 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Dnajc2P54103 621 aaKnown RBP13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Mctp2Q5RJH2 878 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Nip7Q9CXK8 180 aaKnown RBP13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Usp13Q5BKP2 858 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Pcdhb14Q6PB90 796 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Dnajc14Q921R4 703 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Mrc1Q61830 1456 aa13.3□□□□□ -0.28
Vps54-202ENSMUST00000109578 Col22a1E9Q7P1 1613 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Prpf4bQ61136 1007 aaKnown RBP13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Fam160b2Q80YR2 744 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Atp12aQ9Z1W8 1035 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Abca3Q8R420 1704 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Pla2g4fQ50L41 855 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Prl2c1Q5SVL9 228 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Panx2Q6IMP4 677 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Pip4k2bQ80XI4 416 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Bola3Q8CEI1 110 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 4930548H24RikQ9D496 437 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Cyp3a59D3Z2W7 503 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Pde6aP27664 859 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ranbp6Q8BIV3 1105 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 ApobrQ8VBT6 942 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 Eaf2Q91ZD6 262 aa13.29□□□□□ -0.28
Vps54-202ENSMUST00000109578 FocadA2AKG8 1798 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Bin2D3Z6Q9 489 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Cep120Q7TSG1 988 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Kri1Q8VDQ9 704 aaKnown RBP13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Wnk3Q80XP9 1757 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Zbtb38Q3LR78 1197 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Cops6O88545 324 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Znf653Q6YND2 615 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Smim5Q8BT42 78 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ces1dQ8VCT4 565 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Wdr19Q3UGF1 1341 aa13.28□□□□□ -0.28
Vps54-202ENSMUST00000109578 Grin1P35438 938 aa13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 Haus7Q8BKT8 364 aa13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 Tmem87aQ8BXN9 555 aa13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 Cdc27A2A6Q5 825 aa13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 Atp8a2P98200 1148 aa13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 CtcfQ61164 736 aaKnown RBP13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 Ddx41Q91VN6 622 aaKnown RBP13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 Pcdhb22Q91XZ8 794 aa13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 IcoslgQ9JHJ8 322 aa13.27□□□□□ -0.28
Vps54-202ENSMUST00000109578 Tiam2Q6ZPF3 1715 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Col3a1P08121 1464 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 CpdO89001 1377 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Rgs12Q8CGE9 1381 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Gm10134F6ZQC6 126 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ms4a1P19437 291 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Kcnj14Q8JZN3 434 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Tpm1P58771 284 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 9230110C19RikQ8CC70 267 aa13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Lrrc59Q922Q8 307 aaKnown RBP13.27□□□□□ -0.29
Vps54-202ENSMUST00000109578 Pde4bB1AWC9 736 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Diaph1O08808 1255 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Zhx1P70121 873 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Alx1Q8C8B0 326 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Naaladl2A0A0N4SUJ3 795 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Znf326O88291 580 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Cdc37Q61081 379 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Pram1Q6BCL1 675 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Arl8aQ8VEH3 186 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Crb1Q8VHS2 1405 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Atp8b5A3FIN4 1183 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Dapk3O54784 448 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 VeztQ3ZK22 780 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Cyp7a1Q64505 503 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Suclg2Q9Z2I8 433 aa13.26□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ctdspl2Q8BG15 465 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Sept1P42209 366 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Glis3Q6XP49 780 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Filip1Q9CS72 1211 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Abcb6Q9DC29 842 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Kcnq5Q9JK45 933 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Washc4Q3UMB9 1173 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Slfnl1Q8BHW9 410 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Mical1Q8VDP3 1048 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ube3bQ9ES34 1070 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Pde8bE9Q4S1 865 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ugt1a6bK9J7B2 531 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ugt1a6Q64435 531 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ugt1a7cQ6ZQM8 531 aa13.25□□□□□ -0.29
Vps54-202ENSMUST00000109578 Prl3d1P18121 224 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Gnl2Q99LH1 728 aaKnown RBP13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Kcnh3Q9WVJ0 1095 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Zkscan5Q9Z1D8 819 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Agtpbp1Q641K1 1218 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Gnl3lQ6PGG6 577 aaKnown RBP13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Vps37dQ810I0 261 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Rapgef3Q8VCC8 918 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Sirt2Q8VDQ8 389 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Creld2Q9CYA0 350 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Etnk1Q9D4V0 363 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms