RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Ttll12Q3UDE2 639 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 HellsQ60848 821 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Ift122Q6NWV3 1182 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Dpf1Q9QX66 387 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Tnnc1P19123 161 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 SsbP32067 415 aaKnown RBP11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Sem1P60897 70 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Morc4Q8BMD7 928 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Trerf1Q8BXJ2 1205 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Acsbg1Q99PU5 721 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Ndufa8Q9DCJ5 172 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Calm1P0DP26 149 aaKnown RBP11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Calm2P0DP27 149 aaKnown RBP11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Calm3P0DP28 149 aaKnown RBP11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Spc25Q3UA16 226 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Rsph3bQ9DA80 389 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Pdcd6ipQ9WU78 869 aaKnown RBP11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Q4VA45 678 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Gdpd2Q9ESM6 539 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Edc4Q3UJB9 1406 aaKnown RBP11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Ccdc7Q9D541 371 aa11.85□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Zkscan16A2ALW2 728 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Slc4a4O88343 1079 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Gbp5Q8CFB4 590 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Ubxn1Q922Y1 297 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Dph6Q9CQ28 267 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Ccdc82Q6PG04 518 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Asic3Q6X1Y6 530 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Hdac9Q99N13 588 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Eftud2O08810 971 aaKnown RBP11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 ZfaP23607 742 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Gm136Q3V037 328 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Tbc1d31Q6NXY1 996 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Nek11Q8C0Q4 628 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Plcd1Q8R3B1 756 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Gm1993A6X8I0 212 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Prr29B1ARI9 187 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 SlxD3Z347 212 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Zfp213E9QAW0 468 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Krt77Q6IFZ6 572 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Parp14Q2EMV9 1817 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 GnpatP98192 678 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Zfp251Q6PCX8 632 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Nedd9O35177 833 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Tubb2aQ7TMM9 445 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Ublcp1Q8BGR9 318 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Tubb2bQ9CWF2 445 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Rabgap1A2AWA9 1064 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Apol7eQ3UZ24 369 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Usp11Q99K46 921 aa11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Nip7Q9CXK8 180 aaKnown RBP11.84□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Palm3A2TJV2 734 aa11.83□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Capza3P70190 299 aa11.83□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Lmod1Q8BVA4 595 aa11.83□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Spats2Q8K1N4 545 aaKnown RBP11.83□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Pcdhb2Q91Y00 799 aa11.83□□□□□ -0.51
Col6a3-202ENSMUST00000097653 Kif14L0N7N1 1674 aaKnown RBP11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Ms4a1P19437 291 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Gzf1Q4VBD9 706 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Vps52Q8C754 723 aaKnown RBP11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 AU019823E9PUQ3 292 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 ClgnP52194 611 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Larp6Q8BN59 492 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Arhgef6Q8K4I3 771 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Atp2a1Q8R429 994 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Smc6Q924W5 1097 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Xab2Q9DCD2 855 aaKnown RBP11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Pole3Q9JKP7 145 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Abcc2Q8VI47 1543 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Atp2b1G5E829 1220 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Rbm26Q6NZN0 1012 aaKnown RBP11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Atp1a4Q9WV27 1032 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 EnahQ03173 802 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Utp18Q5SSI6 552 aaKnown RBP11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 P4ha1Q60715 534 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Zmynd15Q8C0R7 736 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Smarcc2Q6PDG5 1213 aa11.83□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Tsga10Q6NY15 697 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Farp2Q91VS8 1065 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Fam213aQ9CYH2 218 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Efcc1Q9JJF6 558 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Nup62clA2AG10 272 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Gpr161B2RPY5 545 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Gadd45bP22339 160 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 4930548H24RikQ9D496 437 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Pde3aQ9Z0X4 1141 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Vamp4O70480 141 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Mdm2P23804 489 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Ddx24Q9ESV0 857 aaKnown RBP11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Prim1P20664 417 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Ccdc92Q8VDN4 314 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Nuf2Q99P69 463 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Kdm1aQ6ZQ88 853 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 MthfsQ9D110 203 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Ifit1bl2Q3U687 466 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Ncaph2Q8BSP2 607 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Gna11P21278 359 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Nub1P54729 614 aa11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Luc7l3Q5SUF2 432 aaKnown RBP11.82□□□□□ -0.52
Col6a3-202ENSMUST00000097653 Tmem143Q8VD26 458 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms