RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Bnip3lQ9Z2F7 218 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ptch1Q61115 1434 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Nlrp1bA1Z198 1177 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cpa2Q504N0 417 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Mtus1Q5HZI1 1210 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Eno4Q8C042 619 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ifih1Q8R5F7 1025 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Bin1O08539 588 aaKnown RBP11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 VrtnQ3SYK4 740 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Dpp9Q8BVG4 862 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 CacybpQ9CXW3 229 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Setdb1O88974 1307 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Veph1A1A535 833 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Dok7Q18PE0 504 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Specc1Q5SXY1 1067 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cct8l1Q80YT3 562 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Sec62Q8BU14 398 aaKnown RBP11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Terf2ipQ91VL8 393 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Rfc4Q99J62 364 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Stx1aO35526 288 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Rps8P62242 208 aaKnown RBP11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Aplp1Q03157 653 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Tcerg1lQ3B807 590 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Sun3Q5SS91 320 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Fam83gQ5SWY7 812 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Bloc1s2Q9CWG9 143 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cd2bp2Q9CWK3 342 aaKnown RBP11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 CenpsQ9D084 142 aa11.81□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Trpc6Q61143 930 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Spag5Q7TME2 1165 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Vat1lQ80TB8 417 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Apol10aQ8CCA5 318 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Tacc3Q9JJ11 631 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Gemin5Q8BX17 1502 aaKnown RBP11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Tspyl1O88852 379 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Gsta4P24472 222 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Psmc4P54775 418 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ift122Q6NWV3 1182 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Skor1Q8BX46 964 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Smc1bQ920F6 1248 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Hps4Q99KG7 671 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Gm1043A0A140LJC2 1431 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Duxf3A0A0N4SV92 674 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 MeiocA2AG06 965 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ankrd44B2RXR6 993 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Zkscan8Q8BSL0 588 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cep19Q9CQA8 163 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Glrx3Q9CQM9 337 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Fndc1E9Q043 1732 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Apol11aE9PZG0 334 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Mapkapk5O54992 473 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cbfa2t2O70374 594 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Atp6v0a2P15920 856 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 YwhaeP62259 255 aaKnown RBP11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 HelbQ6NVF4 1074 aa11.8□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Hdhd2Q3UGR5 259 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ccdc66Q6NS45 935 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Slc17a8Q8BFU8 601 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Als2cr12Q8BVM7 383 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Gtf2iQ9ESZ8 998 aaKnown RBP11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Slc5a4aQ9ET37 656 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Nolc1E9Q5C9 702 aaKnown RBP11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cdcp1Q5U462 833 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 NkapQ9D0F4 415 aaKnown RBP11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 3425401B19RikD3Z1D3 1412 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Plekhg1F6S200 1446 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ano3A2AHL1 981 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Diaph2O70566 1098 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Rnf180Q3U827 592 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Pym1Q8CHP5 203 aaKnown RBP11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 YarsQ91WQ3 528 aaKnown RBP11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 AmfrQ9R049 643 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Slx4Q6P1D7 1565 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Anapc15-psA0A140T8L6 141 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Trim55G3X8Y1 545 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Nfil3O08750 462 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Eif4a2P10630 407 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 LdhbP16125 334 aaKnown RBP11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Hoxd10P28359 340 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Crybg3Q80W49 1005 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Rnaseh2aQ9CWY8 301 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Fbxo3Q9DC63 480 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Igbp1bQ9QZ29 343 aa11.79□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Prl3d3A0A0M6L0J6 224 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Eya2O08575 532 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ccdc85aQ5SP85 500 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ift88Q61371 824 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 B4galnt4Q766D5 1034 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Rab3gap1Q80UJ7 981 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Sulf1Q8K007 870 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Adamts12Q811B3 1600 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Robo2Q7TPD3 1470 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Arhgef10lA2AWP8 1280 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Prr16A3KMN5 304 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Bach1P97302 739 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Prkab2Q6PAM0 271 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ift57Q8BXG3 429 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Lzts2Q91YU6 671 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Mxra7Q9CZH7 178 aa11.78□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Strn3Q9ERG2 796 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms