RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Cacna2d2Q6PHS9 1154 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Nucks1Q80XU3 234 aaKnown RBP12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Cdk5rap3Q99LM2 503 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Chmp2aQ9DB34 222 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Mtmr7Q9Z2C9 660 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 TrdnE9Q9K5 693 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Gna11P21278 359 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Hspa8P63017 646 aaKnown RBP12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Jade1Q6ZPI0 834 aaKnown RBP12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Usp8Q80U87 1080 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ubac1Q8VDI7 409 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Klhdc4Q921I2 584 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Chd1lQ9CXF7 900 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Capn12Q9ER56 720 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Kif9Q9WV04 790 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 NsmfQ99NF2 532 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Armc3A2AU72 881 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Xbp1O35426 267 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Pde4cQ3UEI1 686 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Arhgap30Q640N3 1101 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Satb2Q8VI24 733 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Kcnh5Q920E3 988 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tbc1d9Q3UYK3 1264 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Kdm5dQ62240 1548 aa12.53□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Rapgef1Q3UHC1 1224 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Traf3ip3Q8C0G2 513 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Nudcd3Q8R1N4 363 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Krt25Q8VCW2 446 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Bzw2Q91VK1 419 aaKnown RBP12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Pde6cQ91ZQ1 861 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 PalmQ9Z0P4 383 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Kdm2bQ6P1G2 1309 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Pet2A2AHY8 747 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tnnc2P20801 160 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 PhbP67778 272 aaKnown RBP12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 P2rx5Q3UYI1 455 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Fam160b2Q80YR2 744 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Smarca5Q91ZW3 1051 aaKnown RBP12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 AticQ9CWJ9 592 aaKnown RBP12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Dnaaf1Q9D2H9 634 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Zbtb43Q9DAI4 467 aa12.52□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Arhgap4B1AUY3 965 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 ByslO54825 436 aaKnown RBP12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 S100a5P63084 93 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Nlrp2Q4PLS0 1046 aaKnown RBP12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Ctnna3Q65CL1 895 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Plekhg5Q66T02 1073 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Tmtc4Q8BG19 741 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Lrrc74aA0A1Y7VMD6 494 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Clec16aQ80U30 1036 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Nup58Q8R332 587 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Pdcd7Q9WTY1 482 aa12.52□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Btn2a2A4QPC6 514 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Tbc1d2B1AVH7 922 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Ift81O35594 676 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 SsbP32067 415 aaKnown RBP12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 ScocQ78YZ6 125 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Pja2Q80U04 707 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Ppp1r10Q80W00 888 aaKnown RBP12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Mrps27Q8BK72 415 aaKnown RBP12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 AatfQ9JKX4 526 aaKnown RBP12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Bcap29Q61334 240 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Ankrd6Q69ZU8 712 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 RarsQ9D0I9 660 aaKnown RBP12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Exoc3l2D3YUP5 789 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Stk10O55098 966 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Ercc5P35689 1170 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Pfdn6Q03958 127 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Fgd5Q80UZ0 1219 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Gkap1Q9JMB0 366 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Krt4P07744 525 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Map4k4P97820 1233 aaKnown RBP12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Cnnm4Q69ZF7 771 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Dzip3Q7TPV2 1204 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Prune1Q8BIW1 454 aa12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Spats2lQ91WJ7 558 aaKnown RBP12.51□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Lekr1B2RVN1 116 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Lig3P97386 1015 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Mcm7Q61881 719 aaKnown RBP12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Larp6Q8BN59 492 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Slc14a2Q8R4T9 930 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 2310002L09RikQ9D7L5 217 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Gm6657A0A1B0GRJ3 277 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Gm5934D3Z4U6 212 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 VeztQ3ZK22 780 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Brd2Q7JJ13 798 aaKnown RBP12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Daam2Q80U19 1115 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Polr3cQ9D483 533 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Il1rapl2Q9ERS6 686 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Ccdc153P0C7Q1 202 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Myd88P22366 296 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Trim60Q8VI40 466 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 MycbpQ9EQS3 103 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Tdrd9Q14BI7 1383 aa12.5□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Klhl14Q69ZK5 630 aa12.49□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Stk38lQ7TSE6 464 aa12.49□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Plekhm2Q80TQ5 1018 aa12.49□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Rcn2Q8BP92 320 aa12.49□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Cct5P80316 541 aaKnown RBP12.49□□□□□ -0.41
Rtn3-202ENSMUST00000065304 Taco1Q8K0Z7 294 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms