RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ftl2P49945 183 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 CebpaP53566 359 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Sh3bp1P55194 680 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Abcf1Q6P542 837 aaKnown RBP11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Cadps2Q8BYR5 1297 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Atad2Q8CDM1 1040 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Riok1Q922Q2 567 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Atp10bB1AWN4 1474 aa11.17□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Cyp26a1O55127 497 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Gm28047Q3US59 414 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Sun3Q5SS91 320 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nlrp9aQ66X03 949 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Morc2aQ69ZX6 1030 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Miga2Q8BK03 593 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Chaf1aQ9QWF0 911 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nid2O88322 1403 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Clic6Q8BHB9 596 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Sp8Q8BMJ8 486 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Usp44Q8C2S0 711 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nat10Q8K224 1024 aaKnown RBP11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nup133Q8R0G9 1155 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Fam76aQ922G2 307 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Polr2dQ9D7M8 142 aaKnown RBP11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Adgrb1Q3UHD1 1582 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Slit2Q9R1B9 1521 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Vmn2r23E9PXI5 849 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Slc4a4O88343 1079 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Abcd1P48410 736 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ehmt1Q5DW34 1296 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 MicalclQ9D5U9 680 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 WtapQ9ER69 396 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Aox4Q3TYQ9 1336 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Nup153E9Q3G8 1462 aaKnown RBP11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Lipo1J3QME6 396 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Slc1a4O35874 532 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Hmx1O70218 332 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Actn3O88990 900 aaKnown RBP11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ints5Q8CHT3 1018 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Desi2Q9D291 194 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Kcnh3Q9WVJ0 1095 aa11.16□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ktn1Q61595 1327 aaKnown RBP11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Bcl9Q9D219 1425 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Dctn1O08788 1281 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 XpcP51612 930 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Mei4Q8BRM6 389 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Dnm3Q8BZ98 863 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Trim52Q8CDV4 233 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Fam114a1Q9D281 569 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Topaz1E5FYH1 1653 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Ifit1bl2Q3U687 466 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Hspa4Q61316 841 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Luc7l2Q7TNC4 392 aaKnown RBP11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Emilin1Q99K41 1017 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Cep89Q9CZX2 791 aa11.15□□□□□ -0.62
Pcdh1-201ENSMUST00000057185 Kcnb2A6H8H5 907 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Gpr182P43142 395 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ctdspl2Q8BG15 465 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Cfap69Q8BH53 942 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ttc12Q8BW49 704 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Wasf1Q8R5H6 559 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Lonrf3Q9D4H7 753 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Lonp2Q9DBN5 852 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Zeb2Q9R0G7 1215 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Magi2Q9WVQ1 1275 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Zkscan5Q9Z1D8 819 aa11.15□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Bin2D3Z6Q9 489 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Stx8O88983 236 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ell2Q3UKU1 639 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ube2oQ6ZPJ3 1288 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Asap2Q7SIG6 958 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Sugp2Q8CH09 1067 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Znf131Q8K3J5 619 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ssfa2Q922B9 1252 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Klhl10Q9D5V2 608 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Naa16Q9DBB4 864 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tfcp2Q9ERA0 502 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ptpn23Q6PB44 1692 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Arfgef2A2A5R2 1792 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Gm20425E9Q035 978 aaKnown RBP11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 SrprbP47758 269 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Fnbp4Q6ZQ03 1031 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ctdp1Q7TSG2 960 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Tubgcp2Q921G8 905 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Abcb6Q9DC29 842 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Sycp2lA0A0M3U1B0 842 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Gm5624F6ZZG8 207 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 LtkP08923 888 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Casp1P29452 402 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Mctp2Q5RJH2 878 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Dcaf5Q80T85 946 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Arl8aQ8VEH3 186 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ppp4r3bQ922R5 820 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Pde3aQ9Z0X4 1141 aa11.14□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Itga6Q61739 1091 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Atg9aQ68FE2 551 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Nyap1Q6PFX7 833 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Rtn1Q8K0T0 780 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Zbtb1Q91VL9 713 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 Ccne2Q9Z238 404 aa11.13□□□□□ -0.63
Pcdh1-201ENSMUST00000057185 D430041D05RikF6ZGR6 1678 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms