RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Coro7Q9D2V7 922 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Bag3Q9JLV1 577 aaKnown RBP10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Folh1O35409 752 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Grin1P35438 938 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Vsnl1P62761 191 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Pcdhb14Q6PB90 796 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Cd209bQ8CJ91 325 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Taf6lQ8R2K4 616 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Lrrfip2Q91WK0 415 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Atp1a4Q9WV27 1032 aa10.6□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Slc4a10Q5DTL9 1118 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Mrps31Q61733 384 aaKnown RBP10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Ccdc82Q6PG04 518 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Arap2Q8BZ05 1703 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Gm43638A0A0J9YU36 694 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Wdhd1P59328 1117 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Kcnh5Q920E3 988 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Ankrd31A0A140LI88 1765 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Arhgef16Q3U5C8 713 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Fbxo41Q6NS60 873 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Baiap3Q80TT2 1134 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Bicdl2Q8CHW5 507 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Nop2Q922K7 793 aaKnown RBP10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Desi2Q9D291 194 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Foxn2E9Q7L6 429 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Pla2g4bP0C871 782 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 FosbP13346 338 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Pfkfb1P70266 471 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Zfp202Q8C879 641 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Echdc1Q9D9V3 322 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 DonsonQ9QXP4 560 aa10.59□□□□□ -0.71
Ccdc171-201ENSMUST00000053414 Gm21680A0A0G2JGR8 267 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Kifc2O08672 792 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Rasal3Q8C2K5 1041 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Tnnt1O88346 262 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 ItgadQ3V0T4 1168 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Smg7Q5RJH6 1138 aaKnown RBP10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Dhx38Q80X98 1228 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Abca15E9PWH4 1668 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 TxlnaQ6PAM1 554 aaKnown RBP10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Myh8P13542 1937 aa10.58□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Gm3409A0A0G2JE67 319 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Ranbp1P34022 203 aaKnown RBP10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Nkx2-5P42582 318 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Ccdc102aQ3TMW1 549 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Hook1Q8BIL5 728 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Tulp1Q9Z273 543 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Map7d2A2AG50 781 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 C2cd2E9Q3C1 696 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Cct2P80314 535 aaKnown RBP10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Evi5P97366 809 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Acbd5Q5XG73 508 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Map3k2Q61083 619 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Slc35g1Q8BY79 368 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 4930572O03RikQ8C5Y0 211 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Luzp1Q8R4U7 1068 aaKnown RBP10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Greb1lB9EJV3 1913 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 LbrQ3U9G9 626 aaKnown RBP10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Tmem132eQ6IEE6 982 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Krt39Q6IFX4 482 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Dennd6aQ8BH65 605 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 ToporslQ9D2F8 683 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Hmg20bQ9Z104 317 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Dock5B2RY04 1868 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Adora1Q60612 326 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Zcwpw1Q6IR42 630 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Slc26a8Q8R0C3 999 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Vmn1r218Q8R261 298 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Trap1Q9CQN1 706 aaKnown RBP10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Mrpl44Q9CY73 333 aaKnown RBP10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Dctpp1Q9QY93 170 aa10.57□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Exoc3l2D3YUP5 789 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Ovgp1Q62010 721 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Rrs1Q9CYH6 365 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Nxnl2Q9D531 156 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Ppp2r3dQ9Z176 491 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Znf638Q61464 1960 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 AfdnQ9QZQ1 1820 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Wdr19Q3UGF1 1341 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Ccdc57Q6PHN1 1016 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Trim56Q80VI1 734 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Haus7Q8BKT8 364 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 PdclQ9DBX2 301 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Usp42B2RQC2 1324 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Tdo2P48776 406 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Ercc3P49135 783 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Specc1lQ2KN98 1118 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Limch1Q3UH68 1057 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 CtcfQ61164 736 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Cgref1Q8R1U2 281 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Tmem39aQ9CYC3 486 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Jakmip2D3YXK0 820 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Wee1P47810 646 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Eva1cP58659 440 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Anp32eP97822 260 aaKnown RBP10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Exoc5Q3TPX4 708 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Atp1a2Q6PIE5 1020 aa10.56□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Akap2O54931 893 aa10.55□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 Traf1P39428 409 aa10.55□□□□□ -0.72
Ccdc171-201ENSMUST00000053414 HellsQ60848 821 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms