RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ccdc178Q8CDV0 866 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Celf2Q9Z0H4 508 aaKnown RBP8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sik3Q6P4S6 1311 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Npc1l1Q6T3U4 1333 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Carmil3Q3UFQ8 1375 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Nkx1-1G3UXB3 402 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ppef1O35655 650 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Pcmtd1P59913 357 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Pramel6Q810Y9 485 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ttc12Q8BW49 704 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sh3bp5lQ99LH9 392 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Rdm1Q9CQK3 281 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sept12Q9D451 317 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Abcc4E9Q236 1325 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Mast3Q3U214 1321 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Oog3Q3UWY1 500 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tmem39bQ810L4 492 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Angel2Q8K1C0 544 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Iffo2Q8R2V2 512 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Erc1Q99MI1 1120 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Sil1Q9EPK6 465 aa8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 PhaxQ9JJT9 385 aaKnown RBP8.16□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Krt24A1L317 512 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Trim30aP15533 496 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Mcm2P97310 904 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tceanc2Q8R2M0 207 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Top1mtQ8R4U6 593 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tnks1bp1P58871 1720 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Tiam2Q6ZPF3 1715 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 1700003F12RikA2AKE5 210 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 MccE9PWI3 1003 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 AaasP58742 546 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Dync1li2Q6PDL0 492 aaKnown RBP8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Kdm4aQ8BW72 1064 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Ascc2Q91WR3 749 aa8.15□□□□□ -1.1
Bdnf-201ENSMUST00000053317 Mical3Q8CJ19 1993 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Grem2O88273 168 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Stx8O88983 236 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Rhbdl3P58873 404 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Wwc1Q5SXA9 1104 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Kbtbd13Q8C828 458 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Sgip1Q8VD37 806 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Trpm3Q5F4S9 1721 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Slc27a3O88561 667 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 AsnsQ61024 561 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Rapgefl1Q68EF8 662 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ift74Q8BKE9 600 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 DmtnQ9WV69 405 aa8.15□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Myo3bQ1EG27 1305 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 HunkO88866 714 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 FosbP13346 338 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Atxn7Q8R4I1 867 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Gm3893E9Q1I1 302 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 VrtnQ3SYK4 740 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Gprin1Q3UNH4 932 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Best3Q6H1V1 669 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Trim56Q80VI1 734 aaKnown RBP8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 PdgfdQ925I7 370 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 FliiQ9JJ28 1271 aa8.14□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tjp1P39447 1745 aaKnown RBP8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Dennd3A2RT67 1274 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Zbtb21E9Q444 1094 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Il7P10168 154 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Wnt10bP48614 389 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Fam13bQ8K2H3 851 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Efcc1Q9JJF6 558 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Wdr63B2RY71 923 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Copb2O55029 905 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Prpf38aQ4FK66 312 aaKnown RBP8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Mre11Q61216 706 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Senp6Q6P7W0 1132 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Rbm28Q8CGC6 750 aaKnown RBP8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Rbm43Q99J64 343 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ly75Q60767 1723 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Shank3Q4ACU6 1730 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Cyp3a57D3YYZ0 503 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Grm1P97772 1199 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Tfcp2l1Q3UNW5 479 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ube3cQ80U95 1083 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 RestQ8VIG1 1082 aa8.13□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Prss40A6H6T1 365 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 F2rP30558 430 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Plekhf1Q3TB82 279 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Micall1Q8BGT6 870 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Dynll2Q9D0M5 89 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ddx20Q9JJY4 825 aaKnown RBP8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ttc41Q692V3 1318 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ppp2r3aB2RXC8 1150 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Eid1Q9DCR4 169 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Pdcd6ipQ9WU78 869 aaKnown RBP8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Slc1a4O35874 532 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 OsbpQ3B7Z2 805 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Myl10Q62082 202 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Ube3bQ9ES34 1070 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Brd1E9PZ26 1189 aaKnown RBP8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Fgl2P12804 432 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Nkx1-2P42580 305 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 LeprP48356 1162 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Traf5P70191 558 aa8.12□□□□□ -1.11
Bdnf-201ENSMUST00000053317 Otud5Q3U2S4 566 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms