RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Peak1Q69Z38 1735 aa10.62□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 CrcpO35427 148 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Hspd1P63038 573 aaKnown RBP10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Map9Q3TRR0 646 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Large2Q5XPT3 690 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Tmc1Q8R4P5 757 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Mlh1Q9JK91 760 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Add2Q9QYB8 725 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Arid4aF8VPQ2 1261 aaKnown RBP10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Dhx16G3X8X0 1044 aaKnown RBP10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 1700018B08RikQ9DA83 213 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Klf15Q9EPW2 415 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Aox3G3X982 1335 aa10.61□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Rbm8a2A0A0N4SUH6 174 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Pet2A2AHY8 747 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Eif6O55135 245 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Dynll1P63168 89 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Kank4Q6P9J5 1016 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Rbm8aQ9CWZ3 174 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Lamb1P02469 1786 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Gnat2P50149 354 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Lrch1P62046 709 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 NogP97466 232 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Tmed8Q3UHI4 326 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Jakmip1Q8BVL9 626 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Alx1Q8C8B0 326 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Lrrfip2Q91WK0 415 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Tbc1d7Q9D0K0 293 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Jag1Q9QXX0 1218 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Ak2Q9WTP6 239 aa10.6□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 MccE9PWI3 1003 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Ppp4cP97470 307 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Spata18Q0P557 537 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Slc10a5Q5PT54 434 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 CrkQ64010 304 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 SpidrQ8BGX7 933 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Hps4Q99KG7 671 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Pold4Q9CWP8 107 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Slc34a2Q9DBP0 697 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 NrapQ80XB4 1728 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Sik3Q6P4S6 1311 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Bcorl1A2AQH4 1781 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Slc4a4O88343 1079 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Ms4a2P20490 235 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Gas1Q01721 343 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Tom1l2Q5SRX1 507 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Bms1Q6PGF5 1284 aaKnown RBP10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Tex2Q6ZPJ0 1128 aaKnown RBP10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Ankrd13aQ80UP5 588 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Adck5Q80V03 582 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Tshz3Q8CGV9 1081 aa10.59□□□□□ -0.71
Ccdc28a-201ENSMUST00000052648 Cacna1fQ9JIS7 1985 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Kcna3P16390 528 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Npr3P70180 536 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 RubcnlQ3TD16 648 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tm4sf1Q64302 202 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ces1dQ8VCT4 565 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rbm43Q99J64 343 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tfip11Q9ERA6 838 aaKnown RBP10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Aox4Q3TYQ9 1336 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Col24a1Q30D77 1733 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ugt1a5B2RT14 529 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Dock5B2RY04 1868 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Akap2O54931 893 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rps12P63323 132 aaKnown RBP10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rnf180Q3U827 592 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Usp48Q3V0C5 1052 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Map3k12Q60700 888 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tspoap1Q7TNF8 1846 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ptrh1Q8BW00 204 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Stn1Q8K2X3 378 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Kcnq3Q8K3F6 873 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Hdac9Q99N13 588 aa10.58□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Grem2O88273 168 aa10.57□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rnf20Q5DTM8 973 aa10.57□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tmem67Q8BR76 992 aa10.57□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Usp44Q8C2S0 711 aa10.57□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tbc1d23Q8K0F1 684 aa10.57□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Plxnb2B2RXS4 1842 aa10.57□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 NapbP28663 298 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Anapc15P60007 132 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 GmpsQ3THK7 693 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Txnrd3Q99MD6 652 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Stk32bQ9JJX8 414 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Hmg20bQ9Z104 317 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Polr2aP08775 1970 aaKnown RBP10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Mageb2A2AHM0 380 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Prl7a2O54831 253 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 D1Pas1P16381 660 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Mmp14P53690 582 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 NyxP83503 476 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rassf8Q8CJ96 419 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Spon1Q8VCC9 807 aa10.56□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Zkscan16A2ALW2 728 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 GabreA2AMW3 916 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Dennd3A2RT67 1274 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Gm10093D3YYI8 482 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Hdac1O09106 482 aaKnown RBP10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rabep1O35551 862 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Bnip3O55003 187 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms