RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Atp1a3Q6PIC6 1013 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Bola3Q8CEI1 110 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Fam84aQ9D650 292 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 NgdnQ9DB96 315 aaKnown RBP10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Col3a1P08121 1464 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ampd3O08739 766 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Cyp26a1O55127 497 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Kcnf1Q7TSH7 493 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Dnaaf2Q8BPI1 814 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Q8BZJ8 459 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Luzp1Q8R4U7 1068 aaKnown RBP10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 DmtnQ9WV69 405 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Mroh6V9GX81 722 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Epb41l2O70318 988 aaKnown RBP10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 Vps33bP59016 617 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ppfia3P60469 1194 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 Bach1P97302 739 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 Plekhf1Q3TB82 279 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 Zkscan4Q5SZT6 480 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 DymQ8CHY3 669 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 Klc3Q91W40 508 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 FliiQ9JJ28 1271 aa10.77□□□□□ -0.68
Usp28-201ENSMUST00000047349 Olfm5Q8BU90 496 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Mei1Q9D4I2 1268 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Clic4Q9QYB1 253 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Akap11E9Q777 1895 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Izumo3A6PWV3 263 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Lipo1J3QME6 396 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Pde6aP27664 859 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ccdc174Q3U155 467 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ddb1Q3U1J4 1140 aaKnown RBP10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ufl1Q8CCJ3 793 aaKnown RBP10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Tmem143Q8VD26 458 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Trim11Q99PQ2 467 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Smc2Q8CG48 1191 aaKnown RBP10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Alg3Q8K2A8 438 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Pcdhb15Q91Y04 786 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Sil1Q9EPK6 465 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 CpdO89001 1377 aa10.77□□□□□ -0.69
Usp28-201ENSMUST00000047349 Kansl3A2RSY1 903 aaKnown RBP10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ms4a1P19437 291 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 PcQ05920 1178 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 TrhQ62361 256 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Dusp10Q9ESS0 483 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Greb1lB9EJV3 1913 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Sycp2lA0A0M3U1B0 842 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 A0A1L1SQF0 893 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Cdk4P30285 303 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Tsen34Q8BMZ5 316 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ccdc150Q8CDI7 1110 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ybx3Q9JKB3 361 aaKnown RBP10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 4931408C20RikE9PWP9 1381 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Casz1Q9CWL2 1761 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Tpm3-rs7D3Z2H9 248 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Zfp202Q8C879 641 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Kndc1Q0KK55 1742 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Nwd2Q6P5U7 1742 aa10.76□□□□□ -0.69
Usp28-201ENSMUST00000047349 Myh1Q5SX40 1942 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Slc4a4O88343 1079 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Dnm1P39053 867 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Zc3h12cQ5DTV4 884 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Prdm1Q60636 856 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Susd4Q8BH32 490 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Kcnk13Q8R1P5 405 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 HdlbpQ8VDJ3 1268 aaKnown RBP10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Acot9Q9R0X4 439 aaKnown RBP10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Oas2E9Q9A9 742 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Atp2b1G5E829 1220 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 PnnO35691 725 aaKnown RBP10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ckap2Q3V1H1 664 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ano6Q6P9J9 911 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Acnat2Q8BGG9 420 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Shisa4Q8CA71 197 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 WtapQ9ER69 396 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Rgs12Q8CGE9 1381 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Frmd7A2AD83 703 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Dennd3A2RT67 1274 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ube4aE9Q735 1028 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ppp2r5bQ6PD28 497 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Vps37dQ810I0 261 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Lmod1Q8BVA4 595 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Rbm43Q99J64 343 aa10.75□□□□□ -0.69
Usp28-201ENSMUST00000047349 Tbc1d8bA3KGB4 1114 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Cyp2d9P11714 504 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 GabrdP22933 449 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Lrp5Q91VN0 1614 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Pfkfb1P70266 471 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Dhx40Q6PE54 779 aaKnown RBP10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Gimap8Q75N62 688 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Hps6Q8BLY7 805 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Stag1Q9D3E6 1258 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ccdc39Q9D5Y1 937 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Cd3dP04235 173 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Gpatch11Q3UFS4 262 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Prpf4bQ61136 1007 aaKnown RBP10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Tcp11l1Q8BTG3 509 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Inpp5bQ8K337 993 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 Ifi35Q9D8C4 286 aa10.74□□□□□ -0.69
Usp28-201ENSMUST00000047349 1700029H14RikE9PY36 240 aa10.73□□□□□ -0.69
Usp28-201ENSMUST00000047349 Myo1bP46735 1107 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms