RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 SdsQ8VBT2 327 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gpr162Q3UN16 588 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Nek11Q8C0Q4 628 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Slc18a1Q8R090 521 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Hps4Q99KG7 671 aa9.93□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Kif24Q6NWW5 1356 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Dcaf17Q3TUL7 519 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Dcaf5Q80T85 946 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Akt1s1Q9D1F4 257 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Lrrc9Q8CDN9 1456 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Clul1Q3ZRW6 464 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gzf1Q4VBD9 706 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 SltmQ8CH25 1031 aaKnown RBP9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Zfpm1O35615 995 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Nop53Q8BK35 484 aaKnown RBP9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ppp1r16bQ8VHQ3 568 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Dynll1P63168 89 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Pdcl2Q78Y63 240 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Mmp8O70138 465 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Mnat1P51949 309 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Paxbp1P58501 919 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Haus6Q6NV99 933 aaKnown RBP9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 CsadQ9DBE0 493 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 NapaQ9DB05 295 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ccdc42Q5SV66 316 aa9.92□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Adgrl3Q80TS3 1537 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cyp2c67Q569X9 491 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ehbp1Q69ZW3 1231 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cd248Q91V98 765 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Fam76aQ922G2 307 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 1700013D24RikQ0P521 120 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Vat1lQ80TB8 417 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Fez2Q6TYB5 348 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gm44503E9PYU5 387 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Znf394Q9Z1D9 521 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 P2rx7Q9Z1M0 595 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Mybbp1aQ7TPV4 1344 aaKnown RBP9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Hdhd2Q3UGR5 259 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Acap3Q6NXL5 833 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cdca7lQ922M5 438 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Fyb2A2A995 729 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Sept7O55131 436 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Rad50P70388 1312 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ankrd50F7BE84 1390 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Sptlc2P97363 560 aaKnown RBP9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ranbp1P34022 203 aaKnown RBP9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 LifrP42703 1092 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Slfnl1Q8BHW9 410 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Usp53P15975 1069 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Pkp1P97350 728 aaKnown RBP9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Dpp8Q80YA7 892 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Olfm5Q8BU90 496 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 CenppQ9CZ92 286 aa9.91□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Hoxb7P09024 217 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Lrrc43Q3V0L5 667 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Krt23Q99PS0 422 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Sept14Q9DA97 430 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Magi3Q9EQJ9 1476 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Tcerg1lQ3B807 590 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ankrd24Q80VM7 985 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Bbs9Q811G0 885 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cadps2Q8BYR5 1297 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Ccnt1Q9QWV9 724 aaKnown RBP9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 AW822073A0A0N4SUK1 652 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gimd1E9PW74 217 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Tsta3P23591 321 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Mcm7Q61881 719 aaKnown RBP9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Fam196bQ6GQV1 535 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Tyro3P55144 880 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Naa15Q80UM3 865 aaKnown RBP9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Fermt2Q8CIB5 680 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gys2Q8VCB3 704 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Armc9Q9D2I5 817 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gm11549A0A286YD83 63 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Cacnb3P54285 484 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Gle1Q8R322 699 aa9.9□□□□□ -0.82
Ttc28-201ENSMUST00000040111 Zfp397Q7TNK4 527 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Bzw2Q91VK1 419 aaKnown RBP9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Astn2Q80Z10 1352 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Akap2O54931 893 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Abcb4P21440 1276 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Nucb2P81117 420 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Rapgef1Q3UHC1 1224 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Ctnna2Q61301 953 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Crybg3Q80W49 1005 aa9.9□□□□□ -0.83
Ttc28-201ENSMUST00000040111 MthfslL7N466 203 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Mcm6P97311 821 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Tex35Q14BK3 207 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Gtpbp6Q3U6U5 514 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Ppp1r10Q80W00 888 aaKnown RBP9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Smco2Q9DA21 347 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Pus7B7ZNL8 666 aaKnown RBP9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Sdccag8Q80UF4 717 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Fam114a1Q9D281 569 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Acot9Q9R0X4 439 aaKnown RBP9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 EhhadhQ9DBM2 718 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Pkd2l2Q9JLG4 621 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 HarsQ61035 509 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Syap1Q9D5V6 365 aa9.89□□□□□ -0.83
Ttc28-201ENSMUST00000040111 Ttc21aQ8C0S4 1314 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms