RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Fam177a1Q8BR63 207 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Phf20l1Q8CCJ9 1013 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Creld2Q9CYA0 350 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ppp2r3dQ9Z176 491 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Flad1Q8R123 492 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ppp4r3bQ922R5 820 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Myo1cQ9WTI7 1063 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 IncenpQ9WU62 880 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Kcnb2A6H8H5 907 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Zrsr2Q62377 462 aaKnown RBP12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Morc2aQ69ZX6 1030 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 AmfrQ9R049 643 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Mctp2Q5RJH2 878 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Itga6Q61739 1091 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ncaph2Q8BSP2 607 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Kif2bQ8C0N1 668 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Spata32Q8C5V0 334 aa12.91□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Vmn2r23E9PXI5 849 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Ankle2Q6P1H6 964 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Vps37cQ8R105 352 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Kcnh5Q920E3 988 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Sorbs3Q9R1Z8 733 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Prr29B1ARI9 187 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Bbof1Q3V079 533 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cwc25Q9DBF7 416 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Adcy9P51830 1353 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Tshz1Q5DTH5 1084 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 AW822073A0A0N4SUK1 652 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Kif3cO35066 796 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Cct5P80316 541 aaKnown RBP12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Txndc16Q7TN22 820 aa12.9□□□□□ -0.34
Topbp1-201ENSMUST00000035164 Slc5a1Q8C3K6 665 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 MbipQ99LQ1 341 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tubb4aQ9D6F9 444 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Grin2dQ03391 1323 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 A0A1W2P6Q8 802 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Gm9048A0A1W2P7H4 802 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 A0A1W2P7S8 802 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 A0A1W2P7Z8 802 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Gm9046A0A1W2P855 802 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Capn2O08529 700 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Smg7Q5RJH6 1138 aaKnown RBP12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cdc5lQ6A068 802 aaKnown RBP12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 RragbQ6NTA4 374 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ints4Q8CIM8 964 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tut1Q8R3F9 869 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Gm20425E9Q035 978 aaKnown RBP12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cyp26a1O55127 497 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 SrprbP47758 269 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 HellsQ60848 821 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 MmeQ61391 750 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Usp44Q8C2S0 711 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 BaatQ91X34 420 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tada3Q8R0L9 432 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tfcp2Q9ERA0 502 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cbx8Q9QXV1 362 aa12.89□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Atad2Q8CDM1 1040 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Myl3P09542 204 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 C87499Q3UX49 493 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pla2g4fQ50L41 855 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tshz2Q68FE9 1030 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Dzip1Q8BMD2 852 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Rdm1Q9CQK3 281 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cul9Q80TT8 1865 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 PtprmP28828 1452 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Usp42B2RQC2 1324 aaKnown RBP12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Top1Q04750 767 aaKnown RBP12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ankk1Q8BZ25 745 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tmem266Q8BZB3 538 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Prex1Q69ZK0 1650 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Rsph10bE9PYQ0 876 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ttc12Q8BW49 704 aa12.88□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cdk5rap2Q8K389 1822 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Gjc1P28229 396 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pram1Q6BCL1 675 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Tcp11l1Q8BTG3 509 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ncoa5Q91W39 579 aaKnown RBP12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Krt23Q99PS0 422 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Kidins220E9Q9B7 1793 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Rgs9O54828 675 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cct6aP80317 531 aaKnown RBP12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Dpf2Q61103 391 aaKnown RBP12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Acap3Q6NXL5 833 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 ThemisQ8BGW0 636 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cbx6Q9DBY5 414 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Egfl6Q9JJZ5 550 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ino80Q6ZPV2 1559 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Hecw1Q8K4P8 1604 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 H2afxP27661 143 aaKnown RBP12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Cnga2Q62398 664 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Eya2O08575 532 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Igfbp6P47880 238 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 TxlnaQ6PAM1 554 aaKnown RBP12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Efcab8Q8C9R9 203 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Bicdl2Q8CHW5 507 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Pdzd9Q9D9M4 266 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ercc4Q9QZD4 917 aa12.87□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Ampd3O08739 766 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Hdgfl1Q2VPR5 283 aa12.86□□□□□ -0.35
Topbp1-201ENSMUST00000035164 Col1a2Q01149 1372 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 88.9 ms