RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Tbc1d8Q9Z1A9 1134 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 StrcQ8VIM6 1809 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Wdr19Q3UGF1 1341 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Gm29094F6Q785 221 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Cavin1O54724 392 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 VeztQ3ZK22 780 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 MthfsQ9D110 203 aa13.25□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Prdm11A2AGX3 565 aa13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Clec11aO88200 328 aa13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ftl2P49945 183 aa13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Pald1P70261 859 aa13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Atp8a2P98200 1148 aa13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Fam84aQ9D650 292 aa13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Sik3Q6P4S6 1311 aa13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Zswim8Q3UHH1 1832 aaKnown RBP13.24□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Kansl3A2RSY1 903 aaKnown RBP13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Gm973E9Q295 1059 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Anxa1P10107 346 aaKnown RBP13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Rrp1P56183 494 aaKnown RBP13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Fam160b2Q80YR2 744 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 ImmtQ8CAQ8 757 aaKnown RBP13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Rbm5Q91YE7 815 aaKnown RBP13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 St5Q924W7 1134 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Appbp2Q9DAX9 585 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Trpc5Q9QX29 975 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Lrp5Q91VN0 1614 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Gm45140A0A0N4SUM8 220 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Gpr182P43142 395 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 LyarQ08288 388 aaKnown RBP13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Hook1Q8BIL5 728 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Gpatch3Q8BIY1 525 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Col4a3bpQ9EQG9 624 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Sall1Q9ER74 1322 aa13.23□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Stx1aO35526 288 aa13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Snrpa1P57784 255 aaKnown RBP13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ccdc82Q6PG04 518 aa13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Map10Q8BJS7 891 aa13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Zkscan8Q8BSL0 588 aa13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Shisa4Q8CA71 197 aa13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Sf3b3Q921M3 1217 aaKnown RBP13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Grpel1Q99LP6 217 aa13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Col3a1P08121 1464 aa13.22□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Cfap99A0A140LIX9 648 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ercc3P49135 783 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 CebpzP53569 1052 aaKnown RBP13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 ErmnQ5EBJ4 281 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Slc38a10Q5I012 1090 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Hand2Q61039 217 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 TrhQ62361 256 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Tsen34Q8BMZ5 316 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Adam1bQ8R534 806 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Terf2ipQ91VL8 393 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Snw1Q9CSN1 536 aaKnown RBP13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Naa16Q9DBB4 864 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Kcnq5Q9JK45 933 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Col4a5Q63ZW6 1691 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Gm7347D3YYI9 267 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Bin2D3Z6Q9 489 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Speer4aF8VPX6 267 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 RdxP26043 583 aaKnown RBP13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Atp2b3Q0VF55 1220 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Atxn2lQ7TQH0 1049 aaKnown RBP13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Srek1Q8BZX4 494 aaKnown RBP13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Popdc2Q9ES82 367 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Ccne2Q9Z238 404 aa13.21□□□□□ -0.29
Ddx56-201ENSMUST00000004507 Sh3tc1G3X9F6 1346 aa13.21□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cfap44E9Q5M6 1843 aa13.21□□□□□ -0.3
Ddx56-201ENSMUST00000004507 EvplQ9D952 2035 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Vmn2r23E9PXI5 849 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Aknad1E9Q8N6 675 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ppfia3P60469 1194 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cep63Q3UPP8 700 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 U2af1l4Q8BGJ9 220 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cep55Q8BT07 462 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Strip1Q8C079 837 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Alg3Q8K2A8 438 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Pcdhb15Q91Y04 786 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Riok1Q922Q2 567 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ccer1Q9CQL2 403 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Telo2Q9DC40 840 aaKnown RBP13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cdc45Q9Z1X9 566 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ambra1A2AH22 1300 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Tcof1O08784 1320 aaKnown RBP13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Il17raQ60943 864 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Tmem59lQ7TNI2 337 aa13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 CrebrfQ8CDG5 640 aaKnown RBP13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Znfx1Q8R151 1909 aaKnown RBP13.2□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Mtcl1Q3UHU5 1945 aa13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cdk4P30285 303 aa13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Atp1a3Q6PIC6 1013 aa13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Slc39a11Q8BWY7 342 aa13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Sde2Q8K1J5 448 aaKnown RBP13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ube3bQ9ES34 1070 aa13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Syt10Q9R0N4 523 aa13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Lgr5Q9Z1P4 907 aa13.19□□□□□ -0.3
Ddx56-201ENSMUST00000004507 1700029H14RikE9PY36 240 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Tpd52l1O54818 204 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Znf326O88291 580 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 PsdQ5DTT2 1024 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ift57Q8BXG3 429 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms