RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SFTA3P0C7M3 94 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 CGB3P0DN86 165 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 CGB7P0DN87 165 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 CCL3L1P16619 93 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 TAS2R30P59541 319 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 CATR1Q13166 79 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 OR2B11Q5JQS5 317 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 TMEM200BQ69YZ2 307 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 TCF23Q7RTU1 214 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 TCTEX1D1Q8N7M0 179 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 OR8B3Q8NGG8 313 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 OR52M1Q8NGK5 317 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 TCTEX1D2Q8WW35 142 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 CORO2AQ92828 525 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 YPEL2Q96QA6 119 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 OR8B2Q96RD0 313 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 SCRT1Q9BWW7 348 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 HRH4Q9H3N8 390 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 CHODLQ9H9P2 273 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 UNKLQ9H9P5 680 aaKnown RBP7.3□□□□□ -1.24
PHGDH-219ENST00000641513 GFOD1Q9NXC2 390 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 COA4Q9NYJ1 87 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 KAAG1Q9UBP8 84 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 MIOXQ9UGB7 285 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 RELNP78509 3460 aa7.3□□□□□ -1.24
PHGDH-219ENST00000641513 ARHGAP32A7KAX9 2087 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 M0R1X1 148 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 NDUFS7O75251 213 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 CLDN1O95832 211 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 IGLV2-14P01704 120 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 OR8U8P0C7N1 319 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 COX6B1P14854 86 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 EPHA1P21709 976 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 GPR6P46095 362 aaPredicted RBP7.29□□□□□ -1.24
PHGDH-219ENST00000641513 CAMLGP49069 296 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 RAB7AP51149 207 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 LOXL3P58215 753 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 VAMP2P63027 116 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 MRPS11P82912 194 aaKnown RBP7.29□□□□□ -1.24
PHGDH-219ENST00000641513 TLE4Q04727 773 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 RHEBQ15382 184 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 TMEM30BQ3MIR4 351 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 MIDNQ504T8 468 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 SP5Q6BEB4 398 aaPredicted RBP7.29□□□□□ -1.24
PHGDH-219ENST00000641513 LYG1Q8N1E2 194 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 TMEM252Q8N6L7 170 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 C15orf54Q8N8G6 183 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 RAB39BQ96DA2 213 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 NEIL1Q96FI4 390 aaPredicted RBP7.29□□□□□ -1.24
PHGDH-219ENST00000641513 CCL19Q99731 98 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 SPOCK3Q9BQ16 436 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 ABHD14AQ9BUJ0 271 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 WFDC1Q9HC57 220 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 SMCO4Q9NRQ5 59 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 PLA2G2EQ9NZK7 142 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 WSB1Q9Y6I7 421 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 LRBAP50851 2863 aa7.29□□□□□ -1.24
PHGDH-219ENST00000641513 USF3Q68DE3 2245 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 IGSF23A1L1A6 192 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 SLC31A2O15432 143 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 FCN3O75636 299 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 MMP23AO75900 390 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 LY86O95711 162 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 F12P00748 615 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 HBE1P02100 147 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 EFNA4P52798 201 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 AKR1C2P52895 323 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 ERVFRD-1P60508 538 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 GNB2P62879 340 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 SRSF3P84103 164 aaKnown RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 ZNF816Q0VGE8 651 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 GUK1Q16774 197 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 RNF212Q495C1 297 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 ZNF66Q6ZN08 573 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 STX12Q86Y82 276 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 OR10G4Q8NGN3 311 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 RBMXL1Q96E39 390 aaKnown RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 C5orf30Q96GV9 206 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 HSD17B10Q99714 261 aaKnown RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 ATP5SQ99766 215 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 PSMG3Q9BT73 122 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 KIAA1456Q9P272 454 aa7.28□□□□□ -1.24
PHGDH-219ENST00000641513 RPUSD1Q9UJJ7 312 aaKnown RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 HRNRQ86YZ3 2850 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-219ENST00000641513 TRBV23-1A0A0A0MS06 115 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 A0A1W2PPH5 198 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 WRBO00258 174 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 TSPAN9O75954 239 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 NXPH3O95157 252 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 FSTL3O95633 263 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 MAS1LP35410 378 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 NPBWR1P48145 328 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 SULT1A1P50225 295 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 ZNF134P52741 427 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 RAB2AP61019 212 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 RPL23AP62750 156 aaKnown RBP7.27□□□□□ -1.25
PHGDH-219ENST00000641513 RPL30P62888 115 aaKnown RBP7.27□□□□□ -1.25
PHGDH-219ENST00000641513 PMS2P11Q13670 270 aa7.27□□□□□ -1.25
PHGDH-219ENST00000641513 TMEM155Q4W5P6 130 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms