RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SNHG12Q9BXW3 62 aa9.13□□□□□ -0.95
SNIP1-204ENST00000638725 FAM186AA6NE01 2351 aa9.13□□□□□ -0.95
SNIP1-204ENST00000638725 IGHV3-43A0A0B4J1X8 118 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 LINC00473A8K010 186 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 C15orf62A8K5M9 175 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 RAB29O14966 203 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 SMPD2O60906 423 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 CLDN14O95500 239 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 IGHV3-43DP0DP04 118 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 EDDM3BP56851 147 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 LINC00696Q6ZRV3 163 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 ZNF826PQ6ZT77 177 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TCF23Q7RTU1 214 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TMPRSS7Q7RTY8 843 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TMEM144Q7Z5S9 345 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TMEM105Q8N8V8 129 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 MRGPRDQ8TDS7 321 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 CIB3Q96Q77 187 aaPredicted RBP9.12□□□□□ -0.95
SNIP1-204ENST00000638725 NEU1Q99519 415 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 FKBP11Q9NYL4 201 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 RBFOX2O43251 390 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNIP1-204ENST00000638725 GCH1P30793 250 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TBC1D28Q2M2D7 210 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TPRX1Q8N7U7 411 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TMEM204Q9BSN7 226 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 PATZ1Q9HBE1 687 aaKnown RBP9.12□□□□□ -0.95
SNIP1-204ENST00000638725 RYDENQ9NUL5 291 aaKnown RBP9.12□□□□□ -0.95
SNIP1-204ENST00000638725 POLR3KQ9Y2Y1 108 aaPredicted RBP9.12□□□□□ -0.95
SNIP1-204ENST00000638725 PXMP4Q9Y6I8 212 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 CACNA1DQ01668 2161 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TMPRSS2O15393 492 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 Q6ZR03 302 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
SNIP1-204ENST00000638725 NINJ1Q92982 152 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 COQ2Q96H96 371 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 QTRT1Q9BXR0 403 aaKnown RBP9.12□□□□□ -0.95
SNIP1-204ENST00000638725 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
SNIP1-204ENST00000638725 TRBV20OR9-2A0A075B6H5 130 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 DEFB108AA8MXU0 73 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 PDE6DO43924 150 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 HNF1AP20823 631 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 SSTR5P35346 364 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 GABRA2P47869 451 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 ZNF766Q5HY98 468 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 FIP1L1Q6UN15 594 aaKnown RBP9.11□□□□□ -0.95
SNIP1-204ENST00000638725 SGMS2Q8NHU3 365 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 SLC25A40Q8TBP6 338 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 SDSLQ96GA7 329 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 DIRC2Q96SL1 478 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 A0A1W2PPV4 95 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 OOEPA6NGQ2 149 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 MARCH11A6NNE9 402 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 OR9G9P0C7N8 305 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 CD99P14209 185 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 CD1BP29016 333 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 ADMP35318 185 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 RAB4BP61018 213 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 FBXW9Q5XUX1 488 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 RFESDQ8TAC1 157 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 KCNIP2Q9NS61 270 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 ELOVL5Q9NYP7 299 aa9.11□□□□□ -0.95
SNIP1-204ENST00000638725 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 SFRP2Q96HF1 295 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 TAAR6Q96RI8 345 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 NAGKQ9UJ70 344 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 PSG11Q9UQ72 335 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 MDFIC2A0A1B0GVS7 189 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 GRIFINA4D1Z8 144 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 F6UZH7 168 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 CD33P20138 364 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 PSG7Q13046 419 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 C1orf194Q5T5A4 169 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 SLC35E4Q6ICL7 350 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 MS4A10Q96PG2 267 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 HES4Q9HCC6 221 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 METRNQ9UJH8 293 aa9.1□□□□□ -0.95
SNIP1-204ENST00000638725 KIR2DL5BA0A0G2JN68 375 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 KIR2DL5BA0A0G2JPC4 375 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 CER1O95813 267 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 ARL14EPLP0DKL9 152 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 MPV17P39210 176 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 MEOX1P50221 254 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 FOXL1Q12952 345 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 LTC4SQ16873 150 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 KIR2DL5AQ8N109 375 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 OR13A1Q8NGR1 328 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 RAB1CQ92928 201 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 R3HDM4Q96D70 268 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 PLPPR2Q96GM1 343 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 OBP2BQ9NPH6 170 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 AHCTF1Q8WYP5 2266 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 ZNF705FA8MVS1 300 aaPredicted RBP9.09□□□□□ -0.95
SNIP1-204ENST00000638725 ZNF705DP0CH99 300 aaPredicted RBP9.09□□□□□ -0.95
SNIP1-204ENST00000638725 ZNF705BP0CI00 300 aaPredicted RBP9.09□□□□□ -0.95
SNIP1-204ENST00000638725 COL8A2P25067 703 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 G0S2P27469 103 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 THBS3P49746 956 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 SOX8P57073 446 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 LRP11Q86VZ4 500 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms