RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TRIM64CA6NLI5 447 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 A8MUU9 505 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MIF4GDA9UHW6 222 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 CLDN25C9JDP6 229 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 H0Y8G0 127 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 RNASEK-C17orf49H0YIS7 233 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 H7C1H1 209 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 DNASE2O00115 360 aaPredicted RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 AP3B1O00203 1094 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MFNGO00587 321 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MRPS12O15235 138 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 RNF13O43567 381 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF207O43670 478 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TPST1O60507 370 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 PLIN3O60664 434 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 CTNSO60931 367 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 SERPINB7O75635 380 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 GATBO75879 557 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 SCO1O75880 301 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 KLHL2O95198 593 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 AHSA1O95433 338 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 GPR75O95800 540 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TSPAN13O95857 204 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 CST1P01037 141 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 CSTAP01040 98 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 GYPAP02724 150 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 CD74P04233 296 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 HMGN2P05204 90 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TPM3P06753 285 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TPM1P09493 284 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TACSTD2P09758 323 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 LINC00032P0C843 101 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 APELAP0DMC3 54 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MYL2P10916 166 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 NQO1P15559 274 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 BGNP21810 368 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 PRKACBP22694 351 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 IVDP26440 423 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 DEKP35659 375 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 GPX4P36969 197 aaPredicted RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 CFHR2P36980 270 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MAGEA6P43360 314 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MAGEA12P43365 314 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 IDH2P48735 452 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 GNG10P50151 68 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB9AP51151 201 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB13P51153 203 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 UBE2E1P51965 193 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 EFNA4P52798 201 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 ARFIP1P53367 373 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 PLTPP55058 493 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 AP1S2P56377 157 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 DSCR4P56555 118 aaPredicted RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MTPNP58546 118 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB10P61026 200 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 ACTR3P61158 418 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TPM4P67936 248 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 HBA1P69905 142 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 HPCAP84074 193 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 DR1Q01658 176 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MEF2BQ02080 365 aaPredicted RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 BIKQ13323 160 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 EDDM3AQ14507 147 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 SPA17Q15506 151 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 LTC4SQ16873 150 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TRMT5Q32P41 509 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TEX30Q5JUR7 227 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF678Q5SXM1 525 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 TPTE2P1Q5T6R2 138 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 LPCAT4Q643R3 524 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2T2Q6IF00 324 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 HCP5Q6MZN7 132 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 C8orf74Q6P047 294 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 EIF3MQ7L2H7 374 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 AAED1Q7RTV5 226 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC16A14Q7RTX9 510 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC16A13Q7RTY0 426 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 VMO1Q7Z5L0 202 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 LINC00523Q86TU6 105 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC28Q86X40 367 aaPredicted RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC6Q86X45 466 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 KRTAP13-1Q8IUC0 172 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 RBM45Q8IUH3 476 aaKnown RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC22A9Q8IVM8 553 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 MSRB3Q8IXL7 192 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 GTPBP8Q8N3Z3 284 aaPredicted RBP0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 C17orf78Q8N4C9 275 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 UBAC2Q8NBM4 344 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 C1orf64Q8NEQ6 169 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR5T1Q8NG75 326 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 GPR32P1Q8NGA4 272 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR4M2Q8NGB6 313 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR52E2Q8NGJ4 325 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR51L1Q8NGJ5 315 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR4A15Q8NGL6 344 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR4A4PQ8NGN8 299 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR6Q1Q8NGQ2 317 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR9Q1Q8NGQ5 310 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR6N1Q8NGY5 312 aa0.55□□□□□ -2.32
SMARCB1-209ENST00000635578 OR51F2Q8NH61 342 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms