RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TLE4Q04727 773 aa6.03□□□□□ -1.44
CTNNA1-244ENST00000627109 LBHQ53QV2 105 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-244ENST00000627109 SAPCD1Q5SSQ6 148 aa6.03□□□□□ -1.44
CTNNA1-244ENST00000627109 C11orf53Q8IXP5 236 aa6.03□□□□□ -1.44
CTNNA1-244ENST00000627109 MBD3L1Q8WWY6 194 aa6.03□□□□□ -1.44
CTNNA1-244ENST00000627109 RTL8AQ9BWD3 113 aa6.03□□□□□ -1.44
CTNNA1-244ENST00000627109 KCNIP1Q9NZI2 227 aa6.03□□□□□ -1.44
CTNNA1-244ENST00000627109 RBFOX3A6NFN3 312 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 CDIPTO14735 213 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 KRASP01116 189 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 SRP19P09132 144 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 CCL20P78556 96 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 KIAA0141Q14154 515 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 ICAM4Q14773 271 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 NCMAPQ5T1S8 102 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 ZNF561Q8N587 486 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 SCCPDHQ8NBX0 429 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 TMEM116Q8NCL8 245 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 CLDND2Q8NHS1 167 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 RBMXL1Q96E39 390 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 FAM234AQ9H0X4 552 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 HIF1ANQ9NWT6 349 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 OR1A1Q9P1Q5 309 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 HELZ2Q9BYK8 2649 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 CLEC12BQ2HXU8 276 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 TBC1D28Q2M2D7 210 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 C4orf17Q53FE4 359 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 RBMS3Q6XE24 437 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 Q6ZRM9 215 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 TCTEX1D2Q8WW35 142 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 RSG1Q9BU20 258 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 PSENENQ9NZ42 101 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 POLDIP2Q9Y2S7 368 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 CEBPZOSA8MTT3 80 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 H0YL77 283 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 DFFBO76075 338 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 OR2H2O95918 312 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 IGLV1-44P01699 117 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 KITLGP21583 273 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 IGHV1-2P23083 117 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 S100A2P29034 98 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 CEACAM6P40199 344 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 GABRA2P47869 451 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 S100A12P80511 92 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 ZNF816Q0VGE8 651 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 EDDM3AQ14507 147 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 VWC2Q2TAL6 325 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 CR1LQ2VPA4 569 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 SPINK9Q5DT21 86 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 HAPLN4Q86UW8 402 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 ZNF429Q86V71 674 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 RFESDQ8TAC1 157 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 SNX22Q96L94 193 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 METTL1Q9UBP6 276 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 TIMM9Q9Y5J7 89 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 MED12LQ86YW9 2145 aa6.02□□□□□ -1.45
CTNNA1-244ENST00000627109 SMCO3A2RU48 225 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 CXorf65A6NEN9 183 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 RAB5AP20339 215 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 TNFSF10P50591 281 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 FABP6P51161 128 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 PDLIM3Q53GG5 364 aaPredicted RBP6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 SLC35E4Q6ICL7 350 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 TCTEX1D1Q8N7M0 179 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 CYB561D1Q8N8Q1 229 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 OR2J1Q9GZK6 312 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 HEYLQ9NQ87 328 aaPredicted RBP6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 PEMTQ9UBM1 199 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 CADP27708 2225 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 TRGV5A0A0B4J1U4 118 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 IGHV3-13P01766 116 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 IGHV3-7P01780 117 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 TGFBR3Q03167 851 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 KHDC3LQ587J8 217 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 C4orf48Q5BLP8 95 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 TMEM14EPQ6UXP3 125 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 Q6ZT83 130 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 C1orf174Q8IYL3 243 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 ZNF525Q8N782 197 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 MUCL1Q96DR8 90 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 MRPL37Q9BZE1 423 aaKnown RBP6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 TMEM242Q9NWH2 141 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 DOPEY2Q9Y3R5 2298 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 HIVEP3Q5T1R4 2406 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 ZFHX4Q86UP3 3567 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 GTF3C1Q12789 2109 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 UBE2L5PA0A1B0GUS4 154 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 LOC102723971A0A1B0GUV8 181 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 PMS2P5A8MQ11 134 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 DEFB108AA8MXU0 73 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 H3BQ15 152 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 AQP7O14520 342 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 ERVS71-1P61550 626 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 PPP1CBP62140 327 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 LRRC75BQ2VPJ9 315 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 PRR30Q53SZ7 412 aaPredicted RBP6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 ZNF787Q6DD87 383 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 HEPN1Q6WQI6 88 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 TPRX1Q8N7U7 411 aa6.01□□□□□ -1.45
CTNNA1-244ENST00000627109 WDR31Q8NA23 367 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms