RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NPIPB13A6NJU9 1138 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 NPIPB4C9JG80 1138 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 TBX6O95947 436 aaPredicted RBP7.68□□□□□ -1.18
VCL-206ENST00000623461 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 MRPL13Q9BYD1 178 aaKnown RBP7.68□□□□□ -1.18
VCL-206ENST00000623461 TRAV9-2A0A087WT02 112 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 MIC13Q5XKP0 118 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 J3QRE1 110 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 K7N7A8 449 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 ATP5IP56385 69 aaPredicted RBP7.68□□□□□ -1.18
VCL-206ENST00000623461 PYY3Q5JQD4 70 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 LILRA6Q6PI73 481 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 CALHM1Q8IU99 346 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 NCOR1P1Q9H4R4 102 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 SERGEFQ9UGK8 458 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 CRYBB3P26998 211 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 NUBP1P53384 320 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 FHL5Q5TD97 284 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 SLC25A28Q96A46 364 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 A0A1W2PRS3 328 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 DCAF10Q5QP82 559 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 TMEM52Q8NDY8 209 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 FAM216AQ8WUB2 273 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 ORAOV1Q8WV07 137 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 SERF1AO75920 110 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 GABRG2P18507 467 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 OTX1P32242 354 aaPredicted RBP7.67□□□□□ -1.18
VCL-206ENST00000623461 UNC119Q13432 240 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 IL11RAQ14626 422 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 CENPWQ5EE01 88 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 ZNF721Q8TF20 911 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 TRBV6-7A0A0A0MS04 114 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 SLC17A3O00476 420 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 ZNF735P0CB33 412 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 GPR183P32249 361 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 TNXAQ16473 311 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 DTX4Q9Y2E6 619 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 CCL2P13500 99 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 LDLRAD2Q5SZI1 272 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 ZNF818PQ6ZRF7 136 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 ADMP35318 185 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 RTP5Q14D33 572 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 CST9Q5W186 159 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 OR1N2Q8NGR9 330 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 C18orf12Q96KH6 178 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 NRTNQ99748 197 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 GLRX2Q9NS18 164 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 NEUROG3Q9Y4Z2 214 aa7.67□□□□□ -1.18
VCL-206ENST00000623461 TRGV5A0A0B4J1U4 118 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 UCNP55089 124 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 AKAP6Q13023 2319 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 DOCK7Q96N67 2140 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 GDF15Q99988 308 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 FBLN5Q9UBX5 448 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 IGKV1-8A0A0C4DH67 115 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 GDF9O60383 454 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 IGFBP3P17936 291 aaPredicted RBP7.66□□□□□ -1.18
VCL-206ENST00000623461 TRA2AQ13595 282 aaKnown RBP eCLIP7.66□□□□□ -1.18
VCL-206ENST00000623461 TCF24Q7RTU0 167 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 SPRED2Q7Z698 418 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 DLL1O00548 723 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 CDIPTO14735 213 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 SRSF4Q08170 494 aaKnown RBP7.66□□□□□ -1.18
VCL-206ENST00000623461 TMEM177Q53S58 311 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 WBP1LQ9NX94 342 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 IZUMO1RA6ND01 250 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 CEACAM18A8MTB9 384 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 K7EQS6 105 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 ADRA2AP08913 450 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 AMMECR1LQ6DCA0 310 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 ASPHD2Q6ICH7 369 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 FAM169BQ8N8A8 192 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 IGKV1D-42A0A075B6H8 117 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 TSPAN2O60636 221 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 SEC11AP67812 179 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 HIST1H1AQ02539 215 aaPredicted RBP7.66□□□□□ -1.18
VCL-206ENST00000623461 Q5PR19 223 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 C9orf40Q8IXQ3 194 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 OR4X2Q8NGF9 303 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 SCNM1Q9BWG6 230 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 THY1P04216 161 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 PRSS12P56730 875 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 ZNF841Q6ZN19 808 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 PKIBQ9C010 78 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 CYTL1Q9NRR1 136 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 F11RQ9Y624 299 aaKnown RBP7.66□□□□□ -1.18
VCL-206ENST00000623461 LHFPL6Q9Y693 200 aa7.66□□□□□ -1.18
VCL-206ENST00000623461 PGPA6NDG6 321 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 C1QTNF9BB2RNN3 333 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 UCP1P25874 307 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 ALKBH6Q3KRA9 238 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 HARBI1Q96MB7 349 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 RASL10BQ96S79 203 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 NPCDR1Q9BY65 106 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 MEGF9Q9H1U4 602 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 TCFL5Q9UL49 500 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 MDC1Q14676 2089 aaKnown RBP7.65□□□□□ -1.18
VCL-206ENST00000623461 IGHV1OR21-1A0A087WYE8 117 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 CXCL1P09341 107 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 GFRALQ6UXV0 394 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms