RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 LIN54Q6MZP7 749 aa16.59■□□□□ 0.25
PMPCA-212ENST00000622209 ZBTB34Q8NCN2 500 aa16.59■□□□□ 0.25
PMPCA-212ENST00000622209 FCAMRQ8WWV6 532 aa16.59■□□□□ 0.25
PMPCA-212ENST00000622209 DDB2Q92466 427 aa16.59■□□□□ 0.25
PMPCA-212ENST00000622209 HSD17B10Q99714 261 aaKnown RBP16.59■□□□□ 0.25
PMPCA-212ENST00000622209 NDUFA13Q9P0J0 144 aa16.59■□□□□ 0.25
PMPCA-212ENST00000622209 LINC00473A8K010 186 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 SPDEFO95238 335 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 HRH1P35367 487 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 LGALS7P47929 136 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 HERV-K104P61576 105 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 PYHIN1Q6K0P9 492 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 BVESQ8NE79 360 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 OR52I2Q8NH67 350 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 SECTM1Q8WVN6 248 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 SLC5A7Q9GZV3 580 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 MTFP1Q9UDX5 166 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 ZNF107Q9UII5 783 aaPredicted RBP16.58■□□□□ 0.24
PMPCA-212ENST00000622209 PRELID3BQ9Y3B1 194 aa16.58■□□□□ 0.24
PMPCA-212ENST00000622209 LINC01548A6NM66 108 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 GABARAPH6UMI1 98 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 EIF4EBP1Q13541 118 aaPredicted RBP16.57■□□□□ 0.24
PMPCA-212ENST00000622209 PSG5Q15238 335 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 TMEM177Q53S58 311 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 ACTBL2Q562R1 376 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 ZNF66Q6ZN08 573 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 STPG2Q8N412 459 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 OR6F1Q8NGZ6 308 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 BORCS5Q969J3 196 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 NOL4LQ96MY1 436 aaPredicted RBP16.57■□□□□ 0.24
PMPCA-212ENST00000622209 HSPB9Q9BQS6 159 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 ZNF2Q9BSG1 426 aaPredicted RBP16.57■□□□□ 0.24
PMPCA-212ENST00000622209 DCUN1D5Q9BTE7 237 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 GON7Q9BXV9 100 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 CCL28Q9NRJ3 127 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 KLK11Q9UBX7 282 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 ZNF580Q9UK33 172 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 A3GALT2U3KPV4 340 aa16.57■□□□□ 0.24
PMPCA-212ENST00000622209 PSMB11A5LHX3 300 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 CTDSPLO15194 276 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 FXYD4P59646 89 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 PLGLAQ15195 96 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 KCTD9Q7L273 389 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 ZNF329Q86UD4 541 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 MOB3AQ96BX8 217 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 DGCR14Q96DF8 476 aaKnown RBP16.56■□□□□ 0.24
PMPCA-212ENST00000622209 FBXL15Q9H469 300 aa16.56■□□□□ 0.24
PMPCA-212ENST00000622209 METTL1Q9UBP6 276 aaKnown RBP16.56■□□□□ 0.24
PMPCA-212ENST00000622209 K7EIL1 84 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 IGF1P05019 195 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 TNFSF8P32971 234 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 KRTAP10-11P60412 298 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 TSPAN5P62079 268 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 SLC35B1P78383 322 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 SSBP1Q04837 148 aaKnown RBP16.55■□□□□ 0.24
PMPCA-212ENST00000622209 IL18Q14116 193 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 RNASE12Q5GAN4 147 aaKnown RBP16.55■□□□□ 0.24
PMPCA-212ENST00000622209 VAX1Q5SQQ9 334 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 MFSD4AQ8N468 514 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 RCC1LQ96I51 464 aaKnown RBP16.55■□□□□ 0.24
PMPCA-212ENST00000622209 LINC00527Q9UJ94 153 aa16.55■□□□□ 0.24
PMPCA-212ENST00000622209 IGHV7-81A0A0B4J1V7 117 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 SHOXO15266 292 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 TBPP20226 339 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 RPL30P62888 115 aaKnown RBP16.54■□□□□ 0.24
PMPCA-212ENST00000622209 DEFB121Q5J5C9 76 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 COMMD1Q8N668 190 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 OSR1Q8TAX0 266 aaPredicted RBP16.54■□□□□ 0.24
PMPCA-212ENST00000622209 HARBI1Q96MB7 349 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 SOSTQ9BQB4 213 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 OR51J1Q9H342 316 aa16.54■□□□□ 0.24
PMPCA-212ENST00000622209 FCGR3BO75015 233 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 CRYZL1O95825 349 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 IGLV2-23P01705 113 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 GNRHRP30968 328 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 HOXD3P31249 432 aaPredicted RBP16.53■□□□□ 0.24
PMPCA-212ENST00000622209 DGCR2P98153 550 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 TMEM17Q86X19 198 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 TMEM229BQ8NBD8 167 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 SMIM4Q8WVI0 70 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 TCTEX1D2Q8WW35 142 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 TAS2R8Q9NYW2 309 aa16.53■□□□□ 0.24
PMPCA-212ENST00000622209 WI2-2373I1.2A0A1W2PRP0 233 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 FABP12A6NFH5 140 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 FCN1O00602 326 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 SLC25A17O43808 307 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 IFNA6P05013 189 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 S100A5P33763 92 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 KIR2DS2P43631 304 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 CX3CL1P78423 397 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 RNASE10Q5GAN6 216 aaKnown RBP16.52■□□□□ 0.24
PMPCA-212ENST00000622209 LPCAT3Q6P1A2 487 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 ZNF562Q6V9R5 426 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 ZNF818PQ6ZRF7 136 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 PPP1R27Q86WC6 154 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 LINC00482Q8N8I6 264 aa16.52■□□□□ 0.24
PMPCA-212ENST00000622209 DPPA5A6NC42 116 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 SRRM4A7MD48 611 aaKnown RBP16.51■□□□□ 0.23
PMPCA-212ENST00000622209 CD3DP04234 171 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 CRYGBP07316 175 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms