RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 LTBP4Q8N2S1 1624 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 AKAP12Q02952 1782 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 NOTCH2Q04721 2471 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 YLPM1P49750 1951 aaKnown RBP2.29□□□□□ -2.04
CPNE3-213ENST00000622183 KIF21AQ7Z4S6 1674 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 CEP170Q5SW79 1584 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 A2MP01023 1474 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 ZFYVE9O95405 1425 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 A0A1W2PP64 1363 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 NUP155O75694 1391 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 KIF15Q9NS87 1388 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 TEX50A0A1B0GTY4 177 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 GNG14A0A1W2PPG7 69 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 SSNA1O43805 119 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 TNNC2P02585 160 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 CD7P09564 240 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 OCM2P0CE71 109 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 C8orf88P0DMB2 117 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 CXCL2P19875 107 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 MAGEA2P43356 314 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 GZMMP51124 257 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 AP3S2P59780 193 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 AKIRIN2Q53H80 203 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 C4orf22Q6V702 233 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 TSC22D3Q99576 134 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 TBX5Q99593 518 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 DDA1Q9BW61 102 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 CDCA4Q9BXL8 241 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 SMDT1Q9H4I9 107 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 SLC22A13Q9Y226 551 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 HDGFL3Q9Y3E1 203 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 HEY1Q9Y5J3 304 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 HSPE1-MOB4S4R3N1 261 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 NUP205Q92621 2012 aa2.29□□□□□ -2.04
CPNE3-213ENST00000622183 WNK3Q9BYP7 1800 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 FAM135AQ9P2D6 1515 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 IFT140Q96RY7 1462 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 CLIP1P30622 1438 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 MTUS2Q5JR59 1369 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 TRAV8-1A0A0A6YYK1 113 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 SDHAF1A6NFY7 115 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 MRASO14807 208 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 ZNF73O43830 326 aaPredicted RBP2.28□□□□□ -2.04
CPNE3-213ENST00000622183 PPBPP02775 128 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 TFPTP0C1Z6 253 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 NBEAP1P0C6P0 100 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 CXCL3P19876 107 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 ATP6V0CP27449 155 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 FUSP35637 526 aaKnown RBP eCLIP2.28□□□□□ -2.04
CPNE3-213ENST00000622183 DAPP51397 102 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 AP2S1P53680 142 aaPredicted RBP2.28□□□□□ -2.04
CPNE3-213ENST00000622183 CCL7P80098 99 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 PSG4Q00888 419 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 FABP5Q01469 135 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 HTR4Q13639 388 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 EBPQ15125 230 aaKnown RBP2.28□□□□□ -2.04
CPNE3-213ENST00000622183 WHAMMP3Q1A5X7 153 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 C5orf46Q6UWT4 87 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 TMEM35BQ8NCS4 154 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 OR10J5Q8NHC4 309 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 RNF133Q8WVZ7 376 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 RASSF5Q8WWW0 418 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 C11orf1Q9H5F2 150 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 TAS2R9Q9NYW1 312 aa2.28□□□□□ -2.04
CPNE3-213ENST00000622183 POLR3HQ9Y535 204 aaPredicted RBP2.28□□□□□ -2.04
CPNE3-213ENST00000622183 CAMSAP2Q08AD1 1489 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 GAPVD1Q14C86 1478 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 UHRF1BP1Q6BDS2 1440 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 DHX57Q6P158 1386 aaKnown RBP2.27□□□□□ -2.05
CPNE3-213ENST00000622183 PTPRJQ12913 1337 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 ZSWIM8A7E2V4 1837 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 PQLC2LA1A4F0 135 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 SMIM23A6NLE4 172 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 F8W036 122 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 M0QZK8 103 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 IFNGP01579 166 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 TSPEAR-AS2P59090 65 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 SNAP25P60880 206 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 RELAQ04206 551 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 MLLT11Q13015 90 aaPredicted RBP2.27□□□□□ -2.05
CPNE3-213ENST00000622183 SMCO1Q147U7 214 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 GUK1Q16774 197 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 FAM229BQ4G0N7 80 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 SYPL2Q5VXT5 272 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 SMIM15Q7Z3B0 74 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 OR11H1Q8NG94 326 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 Q8WTZ3 238 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 PRAP1Q96NZ9 151 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 XPNPEP1Q9NQW7 623 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 GID8Q9NWU2 228 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 HHLA2Q9UM44 414 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 MMACHCQ9Y4U1 282 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 COL18A1P39060 1754 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 CHD1O14646 1710 aa2.27□□□□□ -2.05
CPNE3-213ENST00000622183 BAZ1AQ9NRL2 1556 aaPredicted RBP2.27□□□□□ -2.05
CPNE3-213ENST00000622183 RAPGEF2Q9Y4G8 1499 aa2.26□□□□□ -2.05
CPNE3-213ENST00000622183 SMG6Q86US8 1419 aaKnown RBP2.26□□□□□ -2.05
CPNE3-213ENST00000622183 ZNF407Q9C0G0 2248 aa2.26□□□□□ -2.05
CPNE3-213ENST00000622183 ANKRD36BQ8N2N9 1353 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms