RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 LINC00473A8K010 186 aa17.07■□□□□ 0.32
NEDD4L-237ENST00000617539 DTYMKP23919 212 aa17.07■□□□□ 0.32
NEDD4L-237ENST00000617539 PSMB9P28065 219 aa17.07■□□□□ 0.32
NEDD4L-237ENST00000617539 DUTP33316 252 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-237ENST00000617539 NOTOA8MTQ0 251 aa17.06■□□□□ 0.32
NEDD4L-237ENST00000617539 CNIH1O95406 144 aa17.06■□□□□ 0.32
NEDD4L-237ENST00000617539 CD40LGP29965 261 aa17.06■□□□□ 0.32
NEDD4L-237ENST00000617539 TALDO1P37837 337 aa17.06■□□□□ 0.32
NEDD4L-237ENST00000617539 DEFA5Q01523 94 aa17.06■□□□□ 0.32
NEDD4L-237ENST00000617539 CDNFQ49AH0 187 aa17.06■□□□□ 0.32
NEDD4L-237ENST00000617539 SMAD5-AS1Q9Y6J3 95 aa17.06■□□□□ 0.32
NEDD4L-237ENST00000617539 H3BUA1 57 aa17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 SHOXO15266 292 aa17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 TAGLNQ01995 201 aaKnown RBP17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 RTL8BQ17RB0 113 aa17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 HACD4Q5VWC8 232 aa17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 ZNF355PQ9NSJ1 428 aa17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 STUB1Q9UNE7 303 aa17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 RBM7Q9Y580 266 aaKnown RBP17.05■□□□□ 0.32
NEDD4L-237ENST00000617539 PITPNAQ00169 270 aa17.04■□□□□ 0.32
NEDD4L-237ENST00000617539 IDO2Q6ZQW0 420 aa17.04■□□□□ 0.32
NEDD4L-237ENST00000617539 HAPLN4Q86UW8 402 aa17.04■□□□□ 0.32
NEDD4L-237ENST00000617539 NUDCD2Q8WVJ2 157 aa17.04■□□□□ 0.32
NEDD4L-237ENST00000617539 FCGR1BQ92637 280 aa17.04■□□□□ 0.32
NEDD4L-237ENST00000617539 DAPK2Q9UIK4 370 aa17.04■□□□□ 0.32
NEDD4L-237ENST00000617539 TMEM235A6NFC5 223 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 SSX5O60225 188 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 RBMXL2O75526 392 aaKnown RBP17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 BRI3O95415 125 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 CRYZL1O95825 349 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 APELAP0DMC3 54 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 RRASP10301 218 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 GP9P14770 177 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 UBE2KP61086 200 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 CBX3Q13185 183 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 ARL6IP1Q15041 203 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 LGALS14Q8TCE9 139 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 ADTRPQ96IZ2 230 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 ST6GALNAC5Q9BVH7 336 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 TINAGL1Q9GZM7 467 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 OR51E2Q9H255 320 aa17.03■□□□□ 0.32
NEDD4L-237ENST00000617539 C13orf42A0A1B0GVH6 325 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 ANKRD34BA5PLL1 514 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 TRIM64CA6NLI5 447 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 J3QRK9 145 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 IGLV2-14P01704 120 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 NFYAP23511 347 aaPredicted RBP17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 PRSS8Q16651 343 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 SFXN4Q6P4A7 337 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 TPRA1Q86W33 373 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 SBSPONQ8IVN8 264 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 TEX45Q8NA69 505 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 OR6Q1Q8NGQ2 317 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 CENPOQ9BU64 300 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 RNF167Q9H6Y7 350 aa17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 RRP15Q9Y3B9 282 aaKnown RBP17.02■□□□□ 0.32
NEDD4L-237ENST00000617539 IGKV1D-13A0A0B4J2D9 117 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 MSGN1A6NI15 193 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 HLA-DQB1P01920 261 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 IGKV1-13P0DP09 117 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 DYRK1AQ13627 763 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 ZNF645Q8N7E2 425 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 TMEM68Q96MH6 324 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 DCSTAMPQ9H295 470 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 RANGRFQ9HD47 186 aaPredicted RBP17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 OR2W1Q9Y3N9 320 aa17.01■□□□□ 0.31
NEDD4L-237ENST00000617539 DNAH7Q8WXX0 4024 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 A0A0G2JLM5 398 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 IGLV1-51P01701 117 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 TRBV12-3P01733 135 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 CLEC2LP0C7M8 214 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 SDC2P34741 201 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 RPL30P62888 115 aaKnown RBP17■□□□□ 0.31
NEDD4L-237ENST00000617539 VMA21Q3ZAQ7 101 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 ZNF773Q6PK81 442 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 OVCH2Q7RTZ1 564 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 ADAD2Q8NCV1 583 aaKnown RBP17■□□□□ 0.31
NEDD4L-237ENST00000617539 OSR1Q8TAX0 266 aaPredicted RBP17■□□□□ 0.31
NEDD4L-237ENST00000617539 OR4C12Q96R67 309 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 YTHDF1Q9BYJ9 559 aaKnown RBP17■□□□□ 0.31
NEDD4L-237ENST00000617539 ADAM30Q9UKF2 790 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 SSR3Q9UNL2 185 aa17■□□□□ 0.31
NEDD4L-237ENST00000617539 FRMD6-AS1P0C7T7 363 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 SAA1P0DJI8 122 aaPredicted RBP16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 ZP3P21754 424 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 EIF4EBP1Q13541 118 aaPredicted RBP16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 KLF5Q13887 457 aaPredicted RBP16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 TNXAQ16473 311 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 ZNF343Q6P1L6 599 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 IL34Q6ZMJ4 242 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 SRSF12Q8WXF0 261 aaKnown RBP16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 SLC25A38Q96DW6 304 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 Q9H521 79 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 ZNF430Q9H8G1 570 aaPredicted RBP16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 RHBDL2Q9NX52 303 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 COA4Q9NYJ1 87 aa16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 RBMX2Q9Y388 322 aaKnown RBP16.99■□□□□ 0.31
NEDD4L-237ENST00000617539 FCGR3BO75015 233 aa16.98■□□□□ 0.31
NEDD4L-237ENST00000617539 CTXN2P0C2S0 81 aa16.98■□□□□ 0.31
NEDD4L-237ENST00000617539 MXD1Q05195 221 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms