RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 QTRT1Q9BXR0 403 aaKnown RBP13.03□□□□□ -0.32
GPN1-212ENST00000616939 MRPL18Q9H0U6 180 aaKnown RBP13.03□□□□□ -0.32
GPN1-212ENST00000616939 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 CACNA1EQ15878 2313 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 TRBV20OR9-2A0A075B6H5 130 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 SERF1AO75920 110 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 NEURL1O76050 574 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 NPSP0C0P6 89 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 COMPP49747 757 aaPredicted RBP13.02□□□□□ -0.32
GPN1-212ENST00000616939 LGALS4P56470 323 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 BRWD1-AS2P59051 145 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 RPP30P78346 268 aaKnown RBP13.02□□□□□ -0.32
GPN1-212ENST00000616939 ZNF816Q0VGE8 651 aaPredicted RBP13.02□□□□□ -0.32
GPN1-212ENST00000616939 HLA-BQ31612 363 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 PRR18Q8N4B5 295 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 SPEM1Q8N4L4 309 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 HSPB9Q9BQS6 159 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 GP6Q9HCN6 339 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 DEPPQ9NTK1 212 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 BOKQ9UMX3 212 aaPredicted RBP13.02□□□□□ -0.32
GPN1-212ENST00000616939 ARL2-SNX15V9GYD0 113 aa13.02□□□□□ -0.32
GPN1-212ENST00000616939 DOCK11Q5JSL3 2073 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 ZNF891A8MT65 544 aaPredicted RBP13.02□□□□□ -0.33
GPN1-212ENST00000616939 C17orf98A8MV24 154 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 EGR1P18146 543 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 TMPRSS3P57727 454 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 UBE2G2P60604 165 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 TGFBR3Q03167 851 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 ARSJQ5FYB0 599 aaPredicted RBP13.02□□□□□ -0.33
GPN1-212ENST00000616939 COL5A1-AS1Q5SY13 56 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 SLC35E4Q6ICL7 350 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 GALMQ96C23 342 aa13.02□□□□□ -0.33
GPN1-212ENST00000616939 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.33
GPN1-212ENST00000616939 MED12LQ86YW9 2145 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 OOEPA6NGQ2 149 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 CDIPTO14735 213 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 MT-ND6P03923 174 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 CA6P23280 308 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 ZNF90Q03938 601 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 WDR86Q86TI4 376 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 SCCPDHQ8NBX0 429 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 FAM216AQ8WUB2 273 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 HSD17B10Q99714 261 aaKnown RBP13.01□□□□□ -0.33
GPN1-212ENST00000616939 SDK2Q58EX2 2172 aa13.01□□□□□ -0.33
GPN1-212ENST00000616939 FREM1Q5H8C1 2179 aa13□□□□□ -0.33
GPN1-212ENST00000616939 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
GPN1-212ENST00000616939 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
GPN1-212ENST00000616939 A6NNC1 897 aa13□□□□□ -0.33
GPN1-212ENST00000616939 REG1AP05451 166 aa13□□□□□ -0.33
GPN1-212ENST00000616939 AREGP15514 252 aa13□□□□□ -0.33
GPN1-212ENST00000616939 FOXG1P55316 489 aaPredicted RBP13□□□□□ -0.33
GPN1-212ENST00000616939 CLDN18P56856 261 aa13□□□□□ -0.33
GPN1-212ENST00000616939 RPL19P84098 196 aaKnown RBP13□□□□□ -0.33
GPN1-212ENST00000616939 GABRA6Q16445 453 aa13□□□□□ -0.33
GPN1-212ENST00000616939 PDLIM3Q53GG5 364 aaPredicted RBP13□□□□□ -0.33
GPN1-212ENST00000616939 C9orf135Q5VTT2 229 aa13□□□□□ -0.33
GPN1-212ENST00000616939 PPP1R32Q7Z5V6 425 aa13□□□□□ -0.33
GPN1-212ENST00000616939 OR52E5Q8NH55 327 aa13□□□□□ -0.33
GPN1-212ENST00000616939 OCC1Q8TAD7 63 aa13□□□□□ -0.33
GPN1-212ENST00000616939 APH1AQ96BI3 265 aa13□□□□□ -0.33
GPN1-212ENST00000616939 RNF2Q99496 336 aa13□□□□□ -0.33
GPN1-212ENST00000616939 GNB1LQ9BYB4 327 aa13□□□□□ -0.33
GPN1-212ENST00000616939 PATZ1Q9HBE1 687 aaKnown RBP13□□□□□ -0.33
GPN1-212ENST00000616939 ZFP30Q9Y2G7 519 aa13□□□□□ -0.33
GPN1-212ENST00000616939 TRGV10A0A0A0MS01 117 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 PINLYPA6NC86 204 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 A8MXE2 369 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 C12orf77C9JDV5 145 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 OR10J4P0C629 311 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 ARL14EPLP0DKL9 152 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 CBLN1P23435 193 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 CTRLP40313 264 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 WDR73Q6P4I2 378 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 TUSC5Q8IXB3 177 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 OR1L6Q8NGR2 347 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 ZNF586Q9NXT0 402 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 PI4KAP42356 2102 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 SCO2A0A1W2PP80 73 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 PGPEP1LA6NFU8 196 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 PRSS46E5RG02 174 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 NXPH2O95156 264 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 HAND1O96004 215 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 CDKN1AP38936 164 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 Q0VFX4 171 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 SPATA46Q5T0L3 261 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 DCAF12Q5T6F0 453 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 CYB5R2Q6BCY4 276 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 Q8N976 141 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 IFI44Q8TCB0 444 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 NANOS1Q8WY41 292 aaKnown RBP12.99□□□□□ -0.33
GPN1-212ENST00000616939 PHF7Q9BWX1 381 aaPredicted RBP12.99□□□□□ -0.33
GPN1-212ENST00000616939 SLC45A2Q9UMX9 530 aa12.99□□□□□ -0.33
GPN1-212ENST00000616939 MT-CO2P00403 227 aa12.98□□□□□ -0.33
GPN1-212ENST00000616939 DEFA4P12838 97 aa12.98□□□□□ -0.33
GPN1-212ENST00000616939 SELEP16581 610 aa12.98□□□□□ -0.33
GPN1-212ENST00000616939 EDDM3BP56851 147 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms