RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 CLDN23Q96B33 292 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 MTCH1Q9NZJ7 389 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 MED12LQ86YW9 2145 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 RHBDL1O75783 438 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 COL8A2P25067 703 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 ATP6V1FQ16864 119 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 LINC00696Q6ZRV3 163 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 OR10G8Q8NGN5 311 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 ELOVL5Q9NYP7 299 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
PCDHA11-202ENST00000616325 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 NDUFB8O95169 186 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 CTSSP25774 331 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 RAC3P60763 192 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 LYSMD4Q5XG99 296 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 TUSC5Q8IXB3 177 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 SAXO1Q8IYX7 474 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 OR10P1Q8NGE3 313 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 ST6GALNAC6Q969X2 333 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 PROK2Q9HC23 129 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 ZNF253O75346 499 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 IGLV3-1P01715 115 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 CDC34P49427 236 aaPredicted RBP11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 CEBPDP49716 269 aaPredicted RBP11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 LCN2P80188 198 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 TEX43Q6ZNM6 134 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 KIR2DS1A0A191URI9 304 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 COX6A1P12074 109 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 G6PCP35575 357 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 FOLR3P41439 243 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 KIR2DS4P43632 304 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 KIR2DS1Q14954 304 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 ZNF738Q8NE65 137 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 AGMATQ9BSE5 352 aa11.32□□□□□ -0.6
PCDHA11-202ENST00000616325 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 UQCR10Q9UDW1 63 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 IGKV1-39P01597 117 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 IGKV1D-39P04432 117 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 EPHA8P29322 1005 aaPredicted RBP11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 LINC00205P59089 165 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 KRTCAP3Q53RY4 240 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 OR1L1Q8NH94 360 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 ZNF596Q8TC21 504 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 CPT1CQ8TCG5 803 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 ABHD14BQ96IU4 210 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 UHRF2Q96PU4 802 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 NRN1Q9NPD7 142 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 TP53TG3Q9ULZ0 132 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 OR2W1Q9Y3N9 320 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 ATP23Q9Y6H3 246 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 MED13Q9UHV7 2174 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 NKX6-3A6NJ46 265 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 GRPP07492 148 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 TDGF1P13385 188 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 HLA-DRB5Q30154 266 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 LDLRAD2Q5SZI1 272 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 OCC1Q8TAD7 63 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
PCDHA11-202ENST00000616325 PINLYPA6NC86 204 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 GJE1A6NN92 205 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 HYPMO75409 117 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 KLF3P57682 345 aaPredicted RBP11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 MRPL54Q6P161 138 aaKnown RBP11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 FAM58AQ8N1B3 248 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 FGFRL1Q8N441 504 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 TPRX1Q8N7U7 411 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 SPOCK3Q9BQ16 436 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 GAL3ST2Q9H3Q3 398 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 TYMSP04818 313 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 BORCS7Q96B45 105 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 LRFN3Q9BTN0 628 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 DEPPQ9NTK1 212 aa11.3□□□□□ -0.6
PCDHA11-202ENST00000616325 SCO2A0A1W2PP80 73 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 ZNF503-AS2A6NEH8 195 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 ZG16O60844 167 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 PCBD1P61457 104 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 SELENOTP62341 195 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 Q56UQ5 140 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 MRPL14Q6P1L8 145 aaKnown RBP11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 APOBEC3DQ96AK3 386 aaPredicted RBP11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 GNB4Q9HAV0 340 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 TP73-AS1Q9UF72 201 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 ABCA1O95477 2261 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 IGLV3-32A0A0A0MS00 114 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 DEFB108AA8MXU0 73 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 WNT2P09544 360 aa11.29□□□□□ -0.6
PCDHA11-202ENST00000616325 BPIFB3P59826 476 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms