RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 GNRHRP30968 328 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 GPR141Q7Z602 305 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF554Q86TJ5 538 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 NPBQ8NG41 125 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 OR52I2Q8NH67 350 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 AKR1E2Q96JD6 320 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 HARBI1Q96MB7 349 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 MRPS26Q9BYN8 205 aaKnown RBP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 OR51J1Q9H342 316 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 RIMS4Q9H426 269 aaPredicted RBP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 PRR13Q9NZ81 148 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 WASHC3Q9Y3C0 194 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 CEPT1Q9Y6K0 416 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 OR5H14A6NHG9 310 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 RGS11O94810 467 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 PPYP01298 95 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 IGHV3-23P01764 117 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 HLA-AP01891 365 aaKnown RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 CRYGBP07316 175 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 SAA1P0DJI8 122 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 PF4V1P10720 104 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 RPL23AP62750 156 aaKnown RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 C19orf54Q5BKX5 351 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 PHF21AQ96BD5 680 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 ISOC1Q96CN7 298 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 EHFQ9NZC4 300 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 HUWE1Q7Z6Z7 4374 aaKnown RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 RGS5O15539 181 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 DTYMKP23919 212 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 ARHGDIBP52566 201 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 SLURP1P55000 103 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 KIR2DS1Q14954 304 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 PHLDA2Q53GA4 152 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 NDUFA11Q86Y39 141 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 FLYWCH2Q96CP2 140 aaKnown RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF2Q9BSG1 426 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 ZC4H2Q9NQZ6 224 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 EXTL2Q9UBQ6 330 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 WI2-2373I1.2A0A1W2PRP0 233 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 NUDT19A8MXV4 375 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 FAM25AB3EWG3 89 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 FAM25CB3EWG5 89 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 FAM25GB3EWG6 89 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 CD3DP04234 171 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 THBS3P49746 956 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 ARPC4P59998 168 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 BEAN1Q3B7T3 259 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 SAMD5Q5TGI4 173 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 KCTD9Q7L273 389 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 C16orf82Q7Z2V1 217 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 DYNC2LI1Q8TCX1 351 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 S100A16Q96FQ6 103 aaKnown RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 TOLLIPQ9H0E2 274 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 FXYD6Q9H0Q3 95 aa4.42□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF430Q9H8G1 570 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 RBMX2Q9Y388 322 aaKnown RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 TSSC4Q9Y5U2 329 aaPredicted RBP4.42□□□□□ -1.7
CPNE3-208ENST00000614678 TRAV41A0A0B4J266 112 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 MSGN1A6NI15 193 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 AP4M1O00189 453 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 SHOXO15266 292 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 RLN1P04808 185 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 FXYD3Q14802 87 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 CNIH2Q6PI25 160 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 OVCH2Q7RTZ1 564 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 MFSD4AQ8N468 514 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 LINC00482Q8N8I6 264 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 OR11H1Q8NG94 326 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 OR5AP2Q8NGF4 316 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 OR4X2Q8NGF9 303 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 GPX8Q8TED1 209 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 FCAMRQ8WWV6 532 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 SLIRPQ9GZT3 109 aaKnown RBP4.41□□□□□ -1.7
CPNE3-208ENST00000614678 VCX3AQ9NNX9 186 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ETV7Q9Y603 341 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 S1PR2O95136 353 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 HLA-DRB1P01911 266 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 IGF1P05019 195 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 AREGP15514 252 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 NAT1P18440 290 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 RAB9AP51151 201 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 RORCP51449 518 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 PNLIPRP3Q17RR3 467 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 UNQ5815/PRO19632Q6UWF5 114 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 Q6ZS49 121 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 PPP1R27Q86WC6 154 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF645Q8N7E2 425 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 OR10W1Q8NGF6 305 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 TCTEX1D2Q8WW35 142 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ARPC5LQ9BPX5 153 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 DIABLOQ9NR28 239 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 NUBP2Q9Y5Y2 271 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 IGHV4OR15-8A0A075B7B6 117 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 A0A087WW49 117 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 ANKRD34BA5PLL1 514 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 IGLV1-40P01703 118 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 IGHG4P01861 327 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 TNXAQ16473 311 aa4.41□□□□□ -1.7
CPNE3-208ENST00000614678 TIMM50Q3ZCQ8 353 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms