RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 CHRNA7P36544 502 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 RFX2P48378 723 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 THBS3P49746 956 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 FXYD4P59646 89 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 FOXE3Q13461 319 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 CXorf66Q5JRM2 361 aaPredicted RBP9.87□□□□□ -0.83
CSTF1-208ENST00000613138 GPR141Q7Z602 305 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 SNX29P2Q8IUI4 249 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 CROCCP3Q8IVE0 287 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 ZNF695Q8IW36 515 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 VKORC1L1Q8N0U8 176 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 GRPEL2Q8TAA5 225 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 ZFP57Q9NU63 452 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 TAS2R8Q9NYW2 309 aa9.87□□□□□ -0.83
CSTF1-208ENST00000613138 RBMX2Q9Y388 322 aaKnown RBP9.87□□□□□ -0.83
CSTF1-208ENST00000613138 SHOXO15266 292 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 FCGR3BO75015 233 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 TMEM127O75204 238 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 IGLV1-40P01703 118 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 CTXN2P0C2S0 81 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 OR5H8P0DN80 308 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 TMEM177Q53S58 311 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 PPP1R27Q86WC6 154 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 TMEM17Q86X19 198 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 CLVS1Q8IUQ0 354 aaPredicted RBP9.86□□□□□ -0.83
CSTF1-208ENST00000613138 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 MINDY2Q8NBR6 621 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 LFNGQ8NES3 379 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 MS4A10Q96PG2 267 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 TSNAXQ99598 290 aaKnown RBP9.86□□□□□ -0.83
CSTF1-208ENST00000613138 IFT46Q9NQC8 304 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 ANAPC10Q9UM13 185 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 NUBP2Q9Y5Y2 271 aa9.86□□□□□ -0.83
CSTF1-208ENST00000613138 PPYP01298 95 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 ELANEP08246 267 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 HLA-DMAP28067 261 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 HOXD3P31249 432 aaPredicted RBP9.85□□□□□ -0.83
CSTF1-208ENST00000613138 RORCP51449 518 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 RAB25P57735 213 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 FXYD3Q14802 87 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 CDK10Q15131 360 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 PDLIM3Q53GG5 364 aaPredicted RBP9.85□□□□□ -0.83
CSTF1-208ENST00000613138 C10orf55Q5SWW7 151 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 ASPHD1Q5U4P2 390 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 FOXB2Q5VYV0 432 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 ZNF660Q6AZW8 331 aaPredicted RBP9.85□□□□□ -0.83
CSTF1-208ENST00000613138 UNQ5815/PRO19632Q6UWF5 114 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 KCTD9Q7L273 389 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 LYSMD2Q8IV50 215 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 ZNF491Q8N8L2 437 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 WFDC9Q8NEX5 89 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 OR5AP2Q8NGF4 316 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 MYOZ3Q8TDC0 251 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 TCTEX1D2Q8WW35 142 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 KCTD12Q96CX2 325 aaKnown RBP9.85□□□□□ -0.83
CSTF1-208ENST00000613138 P2RX4Q99571 388 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 RNF5Q99942 180 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 MIXL1Q9H2W2 232 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 EHFQ9NZC4 300 aa9.85□□□□□ -0.83
CSTF1-208ENST00000613138 FAM25AB3EWG3 89 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 FAM25CB3EWG5 89 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 FAM25GB3EWG6 89 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 CCL24O00175 119 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 RAMP3O60896 148 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 DUS4LO95620 317 aaKnown RBP9.84□□□□□ -0.83
CSTF1-208ENST00000613138 IGHV3-11P01762 117 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 SAA1P0DJI8 122 aaPredicted RBP9.84□□□□□ -0.83
CSTF1-208ENST00000613138 MYOD1P15172 320 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 PRSS3P35030 304 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 RAB9AP51151 201 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 CRIP2P52943 208 aaPredicted RBP9.84□□□□□ -0.83
CSTF1-208ENST00000613138 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 RTL8BQ17RB0 113 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 KPRPQ5T749 579 aaPredicted RBP9.84□□□□□ -0.83
CSTF1-208ENST00000613138 ZNF562Q6V9R5 426 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 ZNF818PQ6ZRF7 136 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 C19orf35Q6ZS72 473 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 REC114Q7Z4M0 266 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 MFSD4AQ8N468 514 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 OR5T1Q8NG75 326 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 GPX8Q8TED1 209 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 ARPC1AQ92747 370 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 GPR61Q9BZJ8 451 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 SLC5A7Q9GZV3 580 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 FXYD6Q9H0Q3 95 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 NECAP2Q9NVZ3 263 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 ZNF580Q9UK33 172 aa9.84□□□□□ -0.83
CSTF1-208ENST00000613138 CTDSP2O14595 271 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 RBMXL2O75526 392 aaKnown RBP9.83□□□□□ -0.84
CSTF1-208ENST00000613138 SPDEFO95238 335 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 APOA1P02647 267 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 ZNF182P17025 639 aaPredicted RBP9.83□□□□□ -0.84
CSTF1-208ENST00000613138 NAT1P18440 290 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 HRH1P35367 487 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 CBX5P45973 191 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 CDX1P47902 265 aaPredicted RBP9.83□□□□□ -0.84
CSTF1-208ENST00000613138 ACTBL2Q562R1 376 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 SSX9Q7RTT3 188 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 LAX1Q8IWV1 398 aa9.83□□□□□ -0.84
CSTF1-208ENST00000613138 DCUN1D5Q9BTE7 237 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms