RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ADTRPQ96IZ2 230 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 TMEM68Q96MH6 324 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 GGACTQ9BVM4 153 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 CRIM1Q9NZV1 1036 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 RNF7Q9UBF6 113 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 ZDHHC8Q9ULC8 765 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 A0A087WWC5 75 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 hADV38S2A0JD32 116 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 IQCF6A8MYZ5 107 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 MKRN2OSH3BPM6 223 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 KBTBD11O94819 623 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 FAM3BP58499 235 aaPredicted RBP7.32□□□□□ -1.24
LIG4-204ENST00000611712 STUMQ69YW2 141 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 Q6ZRM9 215 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 ZNRF1Q8ND25 227 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 CCL17Q92583 94 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 DAZAP1Q96EP5 407 aaKnown RBP7.32□□□□□ -1.24
LIG4-204ENST00000611712 PXMP4Q9Y6I8 212 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 NBASA2RRP1 2371 aa7.32□□□□□ -1.24
LIG4-204ENST00000611712 AHRRA9YTQ3 701 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 IGKV1-5P01602 117 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 TFF3Q07654 80 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 MIC13Q5XKP0 118 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 HEPN1Q6WQI6 88 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 ABHD12Q8N2K0 398 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 LURAP1Q96LR2 239 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 QTRT1Q9BXR0 403 aaKnown RBP7.31□□□□□ -1.24
LIG4-204ENST00000611712 ZNF331Q9NQX6 463 aaPredicted RBP7.31□□□□□ -1.24
LIG4-204ENST00000611712 GSN-AS1Q9NRJ2 163 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 SLC45A2Q9UMX9 530 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 ZNF503-AS2A6NEH8 195 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 PSPNO60542 156 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 FTH1P19P0C7X4 201 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 AGAP20933 346 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 PSG5Q15238 335 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 TEPPQ6URK8 271 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 SGMS2Q8NHU3 365 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 NPVFQ9HCQ7 196 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 PKDREJQ9NTG1 2253 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 UBE2CO00762 179 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 CXorf1O96002 111 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 IL3RAP26951 378 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 FAM209BQ5JX69 171 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 PCSK4Q6UW60 755 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 TMEM108Q6UXF1 575 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 RND1Q92730 232 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 NPCDR1Q9BY65 106 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 COA4Q9NYJ1 87 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 DOCK11Q5JSL3 2073 aa7.31□□□□□ -1.24
LIG4-204ENST00000611712 A0A087X0M5 115 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 A0A1B0GX30 115 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 TMEM250H0YL14 139 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 J3QR06 171 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 NDUFA2O43678 99 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 COX7A2P2O60397 106 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 CD59P13987 128 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 GNG4P50150 75 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 RBPJQ06330 500 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 ELOBQ15370 118 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 SLC24A4Q8NFF2 622 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 CCL13Q99616 98 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 FAM103A1Q9BTL3 118 aaKnown RBP7.3□□□□□ -1.24
LIG4-204ENST00000611712 SDF2L1Q9HCN8 221 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 TUBG2Q9NRH3 451 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 TMEM140Q9NV12 185 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 CALYQ9NYX4 217 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 RANBP2P49792 3224 aaKnown RBP7.3□□□□□ -1.24
LIG4-204ENST00000611712 A0A1B0GW64 132 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 FCN1O00602 326 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 MPDU1O75352 247 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 HOXA5P20719 270 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 UBE2G1P62253 170 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 CCL8P80075 99 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 RPL39P5Q59GN2 51 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 PRR27Q6MZM9 219 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 SPSB3Q6PJ21 355 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 MS4A10Q96PG2 267 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 TIMM9Q9Y5J7 89 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 IFNL4K9M1U5 179 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 NDUFB3O43676 98 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 CXCL1P09341 107 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 PAX6P26367 422 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 GNB1P62873 340 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 RTP5Q14D33 572 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 IQCJQ1A5X6 159 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 Q6P435 159 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 CYP2G1PQ6ZSU1 146 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 C9orf106Q8NAJ2 232 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 PCNX1Q96RV3 2341 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 TRBV6-6A0A0A6YYG2 114 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 CEACAM1P13688 526 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 NTF3P20783 257 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 OPRK1P41145 380 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 ZNF146Q15072 292 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 C1orf174Q8IYL3 243 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 GAL3ST2Q9H3Q3 398 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 PLA2G2EQ9NZK7 142 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms