RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 SLC5A7Q9GZV3 580 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 AKIP1Q9NQ31 210 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 BATF3Q9NR55 127 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 PTTG2Q9NZH5 202 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 WASHC3Q9Y3C0 194 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 RBM7Q9Y580 266 aaKnown RBP6.83□□□□□ -1.32
SNCA-212ENST00000611107 TGP01266 2768 aa6.83□□□□□ -1.32
SNCA-212ENST00000611107 ANKRD20A5PA0PJZ0 165 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 FGF16O43320 207 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 APOA2P02652 100 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 ZNF735P0CB33 412 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 PTBP1P26599 531 aaKnown RBP eCLIP6.82□□□□□ -1.32
SNCA-212ENST00000611107 THBS3P49746 956 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 RPL30P62888 115 aaKnown RBP6.82□□□□□ -1.32
SNCA-212ENST00000611107 KLF9Q13886 244 aaPredicted RBP6.82□□□□□ -1.32
SNCA-212ENST00000611107 MMDQ15546 238 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 MSMO1Q15800 293 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 PYDC2Q56P42 97 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 OXLD1Q5BKU9 147 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 AADACL3Q5VUY0 350 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 STEAP1BQ6NZ63 245 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 DHRS11Q6UWP2 260 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 ETV3LQ6ZN32 361 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 KCTD9Q7L273 389 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 PDPNQ86YL7 162 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 Q8N402 240 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 ARRDC1Q8N5I2 433 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 MRGPRFQ96AM1 343 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 CCL28Q9NRJ3 127 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 SLC35D1Q9NTN3 355 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 TAS2R8Q9NYW2 309 aa6.82□□□□□ -1.32
SNCA-212ENST00000611107 H7C2Y5 167 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 TNFSF12O43508 249 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 SLC22A5O76082 557 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 NDUFA3O95167 84 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 RAB3DO95716 219 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 OPN1MWP04001 364 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 AKAIN1P0CW23 69 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 OPN1MW2P0DN77 364 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 OPN1MW3P0DN78 364 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 GNRHRP30968 328 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 PPP5CP53041 499 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 BRWD1-AS2P59051 145 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 TSPAN5P62079 268 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 C2orf68Q2NKX9 166 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 OR2B11Q5JQS5 317 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 SAMD5Q5TGI4 173 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 BVESQ8NE79 360 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 OR6F1Q8NGZ6 308 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 ADTRPQ96IZ2 230 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
SNCA-212ENST00000611107 M0QZK8 103 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 NBR2O15453 112 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 PEX14O75381 377 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 CRYZL1O95825 349 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 IGLV2-23P01705 113 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 IGHG2P01859 326 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 RLN1P04808 185 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 MC5RP33032 325 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 NDPQ00604 133 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 MEF2DQ14814 521 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 BAK1Q16611 211 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 RTL8BQ17RB0 113 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 PDLIM3Q53GG5 364 aaPredicted RBP6.8□□□□□ -1.32
SNCA-212ENST00000611107 TMEM177Q53S58 311 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 ARSJQ5FYB0 599 aaPredicted RBP6.8□□□□□ -1.32
SNCA-212ENST00000611107 CENPVQ7Z7K6 275 aaPredicted RBP6.8□□□□□ -1.32
SNCA-212ENST00000611107 NDUFA11Q86Y39 141 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 NPBQ8NG41 125 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 OR8H1Q8NGG4 311 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 TCTEX1D2Q8WW35 142 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 R3HDM4Q96D70 268 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 HARBI1Q96MB7 349 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 DUX3Q96PT4 197 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 HSD17B10Q99714 261 aaKnown RBP6.8□□□□□ -1.32
SNCA-212ENST00000611107 THAP7Q9BT49 309 aaPredicted RBP6.8□□□□□ -1.32
SNCA-212ENST00000611107 RSRP1Q9BUV0 290 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 LIN7CQ9NUP9 197 aaKnown RBP6.8□□□□□ -1.32
SNCA-212ENST00000611107 FBXO7Q9Y3I1 522 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 DNAH9Q9NYC9 4486 aa6.8□□□□□ -1.32
SNCA-212ENST00000611107 NCBP2LA6PVI3 153 aaKnown RBP6.79□□□□□ -1.32
SNCA-212ENST00000611107 GPR31O00270 319 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 RRHO14718 337 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 SLC25A17O43808 307 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 RAMP3O60896 148 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 FCGR3BO75015 233 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 SPDEFO95238 335 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 HLA-DRB1P01911 266 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 IFNA6P05013 189 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 UCP3P55916 312 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 SSBP2P81877 361 aaPredicted RBP6.79□□□□□ -1.32
SNCA-212ENST00000611107 PSG5Q15238 335 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 C5orf64Q2M2E5 130 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 SCGB2B2Q4G0G5 96 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 PHLDA2Q53GA4 152 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 ZNF66Q6ZN08 573 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 LINC00299Q6ZSB3 139 aa6.79□□□□□ -1.32
SNCA-212ENST00000611107 SLC38A6Q8IZM9 456 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms