RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 FXYD3Q14802 87 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 SRSF7Q16629 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 KPRPQ5T749 579 aaPredicted RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 ZNF660Q6AZW8 331 aaPredicted RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 MRAPQ8TCY5 172 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 C4orf3Q8WVX3 66 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 SLC25A46Q96AG3 418 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
HDDC2-204ENST00000608295 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
HDDC2-204ENST00000608295 SRRM4A7MD48 611 aaKnown RBP11.28□□□□□ -0.6
HDDC2-204ENST00000608295 MYCNOSP40205 109 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 CDX1P47902 265 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-204ENST00000608295 TPPP2P59282 170 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 SSBP2P81877 361 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-204ENST00000608295 TNXAQ16473 311 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 ACTBL2Q562R1 376 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 SNX29P2Q8IUI4 249 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 CROCCP3Q8IVE0 287 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 VKORC1L1Q8N0U8 176 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 ACOT12Q8WYK0 555 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 DDB2Q92466 427 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
HDDC2-204ENST00000608295 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
HDDC2-204ENST00000608295 P2RX4Q99571 388 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 CCL28Q9NRJ3 127 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 NECAP2Q9NVZ3 263 aa11.28□□□□□ -0.6
HDDC2-204ENST00000608295 MRPS7Q9Y2R9 242 aaKnown RBP11.28□□□□□ -0.6
HDDC2-204ENST00000608295 RBMX2Q9Y388 322 aaKnown RBP11.28□□□□□ -0.6
HDDC2-204ENST00000608295 HPGDSO60760 199 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 HLA-DQB1P01920 261 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 CTXN2P0C2S0 81 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 RAB9AP51151 201 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 KRTAP10-11P60412 298 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 WFDC9Q8NEX5 89 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 OR5T1Q8NG75 326 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 PHB2Q99623 299 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 MRPS26Q9BYN8 205 aaKnown RBP11.27□□□□□ -0.61
HDDC2-204ENST00000608295 EHFQ9NZC4 300 aa11.27□□□□□ -0.61
HDDC2-204ENST00000608295 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 A6NJ64 397 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 FAM25AB3EWG3 89 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 FAM25CB3EWG5 89 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 FAM25GB3EWG6 89 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 XRCC3O43542 346 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 PPYP01298 95 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 IGLV2-14P01704 120 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 PMP2P02689 132 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 TRGV3P03979 118 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
HDDC2-204ENST00000608295 VMA21Q3ZAQ7 101 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 TMEM177Q53S58 311 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 RNF152Q8N8N0 203 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 DPF1Q92782 380 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 ADTRPQ96IZ2 230 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 RNF5Q99942 180 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 SLC5A7Q9GZV3 580 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 VSIG4Q9Y279 399 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 NUBP2Q9Y5Y2 271 aa11.26□□□□□ -0.61
HDDC2-204ENST00000608295 GABARAPO95166 117 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 RRASP10301 218 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
HDDC2-204ENST00000608295 SLURP1P55000 103 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 TMEM267Q0VDI3 215 aaPredicted RBP11.25□□□□□ -0.61
HDDC2-204ENST00000608295 KIAA0141Q14154 515 aaPredicted RBP11.25□□□□□ -0.61
HDDC2-204ENST00000608295 CDK10Q15131 360 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 GPR141Q7Z602 305 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 OR5M8Q8NGP6 311 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 OR51H1Q8NH63 302 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 MYOZ3Q8TDC0 251 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 PRELID3BQ9Y3B1 194 aa11.25□□□□□ -0.61
HDDC2-204ENST00000608295 TNCP24821 2201 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 WI2-2373I1.2A0A1W2PRP0 233 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 MPPED1O15442 326 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 CRYGBP07316 175 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 ELK1P19419 428 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 HLA-DMAP28067 261 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 SLC6A1P30531 599 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 CBX5P45973 191 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 LGALS7P47929 136 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 RFX2P48378 723 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 HERV-K104P61576 105 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 CTF1Q16619 201 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 OR5AP2Q8NGF4 316 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
HDDC2-204ENST00000608295 OR5H2Q8NGV7 314 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms