RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 NDUFA3O95167 84 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 SPDEFO95238 335 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 AKAIN1P0CW23 69 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 GNRHRP30968 328 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 UCP3P55916 312 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 AP3S2P59780 193 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 PLGLAQ15195 96 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 C5orf64Q2M2E5 130 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 LIN54Q6MZP7 749 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 Q6ZS46 218 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 FOXRED2Q8IWF2 684 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
CTSA-211ENST00000606066 ANKRD20A5PA0PJZ0 165 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 GPR31O00270 319 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 RRHO14718 337 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 SHOXO15266 292 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 TNFSF12O43508 249 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 FCGR3BO75015 233 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 IGHG2P01859 326 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 VSIG10L2P0DP72 767 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
CTSA-211ENST00000606066 CNPY1Q3B7I2 92 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 ZNF818PQ6ZRF7 136 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 LINC00299Q6ZSB3 139 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 KLHDC1Q8N7A1 406 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 POC5Q8NA72 575 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 OSR1Q8TAX0 266 aaPredicted RBP11.31□□□□□ -0.6
CTSA-211ENST00000606066 WFDC12Q8WWY7 111 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 RBMXL1Q96E39 390 aaKnown RBP11.31□□□□□ -0.6
CTSA-211ENST00000606066 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
CTSA-211ENST00000606066 CRYZL1O95825 349 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 CNTFRP26992 372 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 FAUP35544 74 aaKnown RBP11.3□□□□□ -0.6
CTSA-211ENST00000606066 ECI1P42126 302 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 RPL30P62888 115 aaKnown RBP11.3□□□□□ -0.6
CTSA-211ENST00000606066 ZNF45Q02386 682 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 PSG5Q15238 335 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 ZNF79Q15937 498 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 AADACL3Q5VUY0 350 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 CENPVQ7Z7K6 275 aaPredicted RBP11.3□□□□□ -0.6
CTSA-211ENST00000606066 LHFPL1Q86WI0 220 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 TOMM5Q8N4H5 51 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 GDPD1Q8N9F7 314 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 TERB2Q8NHR7 220 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 CD300LFQ8TDQ1 290 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 PRRT1Q99946 306 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 FXYD6Q9H0Q3 95 aa11.3□□□□□ -0.6
CTSA-211ENST00000606066 METTL1Q9UBP6 276 aaKnown RBP11.3□□□□□ -0.6
CTSA-211ENST00000606066 AP4M1O00189 453 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
CTSA-211ENST00000606066 PGAM2P15259 253 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 OR2B11Q5JQS5 317 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 SPAG16Q8N0X2 631 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 OR4D10Q8NGI6 311 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 CHPT1Q8WUD6 406 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 DEDD2Q8WXF8 326 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 ZNF486Q96H40 463 aaPredicted RBP11.29□□□□□ -0.6
CTSA-211ENST00000606066 AIFM2Q9BRQ8 373 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 RSRP1Q9BUV0 290 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 GON7Q9BXV9 100 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 SRRQ9GZT4 340 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
CTSA-211ENST00000606066 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTSA-211ENST00000606066 SLC25A17O43808 307 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 INPP1P49441 399 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 SLC35B1P78383 322 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 TMEM95Q3KNT9 176 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 OR4C16Q8NGL9 310 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 OR51H1Q8NH63 302 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 ZFAND1Q8TCF1 268 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 MCUBQ9NWR8 336 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 SCP2D1Q9UJQ7 156 aa11.28□□□□□ -0.6
CTSA-211ENST00000606066 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.61
CTSA-211ENST00000606066 HPRT1P00492 218 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 HRASP01112 189 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 RLN1P04808 185 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 ZNF735P0CB33 412 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 UBE2KP61086 200 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.61
CTSA-211ENST00000606066 PHLDA2Q53GA4 152 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 PDLIM3Q53GG5 364 aaPredicted RBP11.27□□□□□ -0.61
CTSA-211ENST00000606066 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 ZNF562Q6V9R5 426 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 TEX45Q8NA69 505 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms