RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 C5orf30Q96GV9 206 aa13□□□□□ -0.33
SCAF1-204ENST00000601038 TINAGL1Q9GZM7 467 aaPredicted RBP13□□□□□ -0.33
SCAF1-204ENST00000601038 ZNF230Q9UIE0 474 aaPredicted RBP13□□□□□ -0.33
SCAF1-204ENST00000601038 RBM7Q9Y580 266 aaKnown RBP13□□□□□ -0.33
SCAF1-204ENST00000601038 RYR3Q15413 4870 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 SHISA3A0PJX4 238 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 IGHV4-30-4P0DP06 118 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 HIST1H1DP16402 221 aaKnown RBP12.99□□□□□ -0.33
SCAF1-204ENST00000601038 MRGPRG-AS1Q2M3A8 158 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 ZNF343Q6P1L6 599 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 IL34Q6ZMJ4 242 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 Q6ZS49 121 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 ZNF367Q7RTV3 350 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 TEX45Q8NA69 505 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 MAFIPQ8WZ33 124 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 DDB2Q92466 427 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 USMG5Q96IX5 58 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 ADTRPQ96IZ2 230 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 GINS4Q9BRT9 223 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
SCAF1-204ENST00000601038 PEF1Q9UBV8 284 aaKnown RBP12.99□□□□□ -0.33
SCAF1-204ENST00000601038 A0A075B6Q4 140 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 MSGN1A6NI15 193 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 MYL9P24844 172 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 DUTP33316 252 aaKnown RBP12.98□□□□□ -0.33
SCAF1-204ENST00000601038 VMA21Q3ZAQ7 101 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 H1FOOQ8IZA3 346 aaPredicted RBP12.98□□□□□ -0.33
SCAF1-204ENST00000601038 CITED4Q96RK1 184 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 NDUFB11Q9NX14 153 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 COA4Q9NYJ1 87 aa12.98□□□□□ -0.33
SCAF1-204ENST00000601038 TNCP24821 2201 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 TRDV1A0A1B0GX56 115 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 H0Y980 276 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 LYL1P12980 280 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 RAB3BP20337 219 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 TALDO1P37837 337 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 SYNJ2BPP57105 145 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 UBE2KP61086 200 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 ARFRP1Q13795 201 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 ARL6IP1Q15041 203 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 PRSS8Q16651 343 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 SGPP2Q8IWX5 399 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 PHB2Q99623 299 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 VCX3BQ9H321 246 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 BLOC1S6Q9UL45 172 aa12.97□□□□□ -0.33
SCAF1-204ENST00000601038 LINC00473A8K010 186 aa12.96□□□□□ -0.33
SCAF1-204ENST00000601038 CRYZL1O95825 349 aa12.96□□□□□ -0.33
SCAF1-204ENST00000601038 OR9G9P0C7N8 305 aa12.96□□□□□ -0.33
SCAF1-204ENST00000601038 GALP22466 123 aa12.96□□□□□ -0.33
SCAF1-204ENST00000601038 HSPA13P48723 471 aa12.96□□□□□ -0.33
SCAF1-204ENST00000601038 ADAD2Q8NCV1 583 aaKnown RBP12.96□□□□□ -0.33
SCAF1-204ENST00000601038 OSR1Q8TAX0 266 aaPredicted RBP12.96□□□□□ -0.33
SCAF1-204ENST00000601038 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
SCAF1-204ENST00000601038 IGKV1D-8A0A087WSZ0 117 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 A0A0B4J203 849 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 APELAP0DMC3 54 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 DTYMKP23919 212 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 DEFA5Q01523 94 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 TNXAQ16473 311 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 IDO2Q6ZQW0 420 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 SRSF12Q8WXF0 261 aaKnown RBP12.95□□□□□ -0.34
SCAF1-204ENST00000601038 SNAPC3Q92966 411 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 CNBD2Q96M20 576 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
SCAF1-204ENST00000601038 RBMXL2O75526 392 aaKnown RBP12.94□□□□□ -0.34
SCAF1-204ENST00000601038 OR2A4O95047 310 aa12.94□□□□□ -0.34
SCAF1-204ENST00000601038 CSN3P07498 182 aa12.94□□□□□ -0.34
SCAF1-204ENST00000601038 CDNFQ49AH0 187 aa12.94□□□□□ -0.34
SCAF1-204ENST00000601038 IZUMO2Q6UXV1 221 aa12.94□□□□□ -0.34
SCAF1-204ENST00000601038 NR2C2APQ86WQ0 139 aa12.94□□□□□ -0.34
SCAF1-204ENST00000601038 ADAM30Q9UKF2 790 aa12.94□□□□□ -0.34
SCAF1-204ENST00000601038 ELF5Q9UKW6 265 aaPredicted RBP12.94□□□□□ -0.34
SCAF1-204ENST00000601038 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 MPPED1O15442 326 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 CREBL2O60519 120 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-204ENST00000601038 CTXN2P0C2S0 81 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 C22orf42Q6IC83 251 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 LCN12Q6JVE5 192 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 ACOT12Q8WYK0 555 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 THAP7Q9BT49 309 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-204ENST00000601038 ST6GALNAC5Q9BVH7 336 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 ZNF430Q9H8G1 570 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-204ENST00000601038 PALMDQ9NP74 551 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 OR2W1Q9Y3N9 320 aa12.93□□□□□ -0.34
SCAF1-204ENST00000601038 HUWE1Q7Z6Z7 4374 aaKnown RBP12.92□□□□□ -0.34
SCAF1-204ENST00000601038 TRBV9A0A0B4J1U6 114 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 SLC22A5O76082 557 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 ACTL6BO94805 426 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 HLA-DQB1P01920 261 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 SAA1P0DJI8 122 aaPredicted RBP12.92□□□□□ -0.34
SCAF1-204ENST00000601038 MECP2P51608 486 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms