RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
LIG1-219ENST00000600055 DCUN1D5Q9BTE7 237 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 TAS2R8Q9NYW2 309 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 RABL2AQ9UBK7 228 aaPredicted RBP11.95□□□□□ -0.5
LIG1-219ENST00000600055 RABL2BQ9UNT1 228 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 FBXO7Q9Y3I1 522 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
LIG1-219ENST00000600055 G3V318 75 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 SHOXO15266 292 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 FCGR3BO75015 233 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 OPN1MWP04001 364 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 IGF1P05019 195 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 OPN1MW2P0DN77 364 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 OPN1MW3P0DN78 364 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 RRASP10301 218 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 RCVRNP35243 200 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 CX3CL1P78423 397 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 CFHR3Q02985 330 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 CBX3Q13185 183 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 DHRS11Q6UWP2 260 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 C18orf65Q6ZTR6 163 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 KCTD9Q7L273 389 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 MFSD4AQ8N468 514 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 TCTEX1D2Q8WW35 142 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 C6orf62Q9GZU0 229 aaPredicted RBP11.94□□□□□ -0.5
LIG1-219ENST00000600055 KLK11Q9UBX7 282 aa11.94□□□□□ -0.5
LIG1-219ENST00000600055 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
LIG1-219ENST00000600055 CMYA5Q8N3K9 4069 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 TPPPO94811 219 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 SPDEFO95238 335 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 CA2P00918 260 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 CRYGBP07316 175 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
LIG1-219ENST00000600055 VDAC1P21796 283 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 LGALS7P47929 136 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 BRWD1-AS2P59051 145 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 HERV-K104P61576 105 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 PJVKQ0ZLH3 352 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 ZNF818PQ6ZRF7 136 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 MOB3AQ96BX8 217 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 R3HDM4Q96D70 268 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 DIRAS2Q96HU8 199 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 HSD17B10Q99714 261 aaKnown RBP11.93□□□□□ -0.5
LIG1-219ENST00000600055 PRELID3BQ9Y3B1 194 aa11.93□□□□□ -0.5
LIG1-219ENST00000600055 M0QYG6 137 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 ARPC1BO15143 372 aaKnown RBP11.92□□□□□ -0.5
LIG1-219ENST00000600055 RPLP1P05386 114 aaKnown RBP11.92□□□□□ -0.5
LIG1-219ENST00000600055 DGCR2P98153 550 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 TEX38Q6PEX7 206 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 ABHD5Q8WTS1 349 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 FAM103A1Q9BTL3 118 aaKnown RBP11.92□□□□□ -0.5
LIG1-219ENST00000600055 NXF2Q9GZY0 626 aaKnown RBP11.92□□□□□ -0.5
LIG1-219ENST00000600055 FXYD6Q9H0Q3 95 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 MTFP1Q9UDX5 166 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 ZNF580Q9UK33 172 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 FBN3Q75N90 2809 aa11.92□□□□□ -0.5
LIG1-219ENST00000600055 TRAV41A0A0B4J266 112 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 PPIFP30405 207 aaKnown RBP11.91□□□□□ -0.5
LIG1-219ENST00000600055 GNRHRP30968 328 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 TSPAN5P62079 268 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 RPL23AP62750 156 aaKnown RBP11.91□□□□□ -0.5
LIG1-219ENST00000600055 GNB1P62873 340 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 SSBP2P81877 361 aaPredicted RBP11.91□□□□□ -0.5
LIG1-219ENST00000600055 MSMO1Q15800 293 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 ECSCRQ19T08 205 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 MRGPRG-AS1Q2M3A8 158 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 FOXB2Q5VYV0 432 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 ZNF562Q6V9R5 426 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 IDO2Q6ZQW0 420 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 PPP1R27Q86WC6 154 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 COMMD1Q8N668 190 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 ZBTB34Q8NCN2 500 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 OR6F1Q8NGZ6 308 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 FCAMRQ8WWV6 532 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 GON7Q9BXV9 100 aa11.91□□□□□ -0.5
LIG1-219ENST00000600055 GABARAPH6UMI1 98 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 IGHG4P01861 327 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 CD3DP04234 171 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 TNFSF8P32971 234 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 UBE2KP61086 200 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 FOXE3Q13461 319 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 IL18Q14116 193 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 FXYD3Q14802 87 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 VKORC1L1Q8N0U8 176 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 OR4F17Q8NGA8 305 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 OR4S2Q8NH73 311 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 OSR1Q8TAX0 266 aaPredicted RBP11.9□□□□□ -0.5
LIG1-219ENST00000600055 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 TINAGL1Q9GZM7 467 aaPredicted RBP11.9□□□□□ -0.5
LIG1-219ENST00000600055 KLK15Q9H2R5 256 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 VWFP04275 2813 aa11.9□□□□□ -0.5
LIG1-219ENST00000600055 PKD1L1Q8TDX9 2849 aa11.89□□□□□ -0.51
LIG1-219ENST00000600055 SOX15O60248 233 aa11.89□□□□□ -0.51
LIG1-219ENST00000600055 RAMP3O60896 148 aa11.89□□□□□ -0.51
LIG1-219ENST00000600055 ELANEP08246 267 aa11.89□□□□□ -0.51
LIG1-219ENST00000600055 SAA1P0DJI8 122 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms