RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ADAD2Q8NCV1 583 aaKnown RBP16.05■□□□□ 0.16
PNKP-212ENST00000599454 OR10J5Q8NHC4 309 aa16.05■□□□□ 0.16
PNKP-212ENST00000599454 UFD1Q92890 307 aa16.05■□□□□ 0.16
PNKP-212ENST00000599454 GFI1Q99684 422 aa16.05■□□□□ 0.16
PNKP-212ENST00000599454 CABLES2Q9BTV7 478 aa16.05■□□□□ 0.16
PNKP-212ENST00000599454 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
PNKP-212ENST00000599454 MSGN1A6NI15 193 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 FAM223BA6NKX1 122 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 EBAG9O00559 213 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 ARL6IP5O75915 188 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 CD3GP09693 182 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 CD81P60033 236 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 TRAM1Q15629 374 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 PLAC9Q5JTB6 97 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 FAM223AQ8IWN6 122 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 ADTRPQ96IZ2 230 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 SLC2A8Q9NY64 477 aa16.04■□□□□ 0.16
PNKP-212ENST00000599454 AK6Q9Y3D8 172 aaKnown RBP16.04■□□□□ 0.16
PNKP-212ENST00000599454 TRBV6-7A0A0A0MS04 114 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 SRRM4A7MD48 611 aaKnown RBP16.03■□□□□ 0.16
PNKP-212ENST00000599454 MPPED1O15442 326 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 TPPPO94811 219 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 UBE2KP61086 200 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 MRGPRG-AS1Q2M3A8 158 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 FAM209BQ5JX69 171 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 LIPKQ5VXJ0 399 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 SRSF12Q8WXF0 261 aaKnown RBP16.03■□□□□ 0.16
PNKP-212ENST00000599454 FAM3DQ96BQ1 224 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 NEURL2Q9BR09 285 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 CENPOQ9BU64 300 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 PLEKHA3Q9HB20 300 aa16.03■□□□□ 0.16
PNKP-212ENST00000599454 PTGES3LE9PB15 166 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 BET1O15155 118 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 DENRO43583 198 aaKnown RBP16.02■□□□□ 0.16
PNKP-212ENST00000599454 CREBL2O60519 120 aaPredicted RBP16.02■□□□□ 0.16
PNKP-212ENST00000599454 PSMA1P25786 263 aaKnown RBP16.02■□□□□ 0.16
PNKP-212ENST00000599454 TNXAQ16473 311 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 PRSS8Q16651 343 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 IGSF11Q5DX21 431 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 TMEM91Q6ZNR0 172 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 TMEM203Q969S6 136 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 RETNQ9HD89 108 aa16.02■□□□□ 0.16
PNKP-212ENST00000599454 BMPR1BO00238 502 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 RBMXL2O75526 392 aaKnown RBP16.01■□□□□ 0.15
PNKP-212ENST00000599454 TUSC2O75896 110 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 FCGR3AP08637 254 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 APELAP0DMC3 54 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 PSMD7P51665 324 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 RHOGP84095 191 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 ATP5G2Q06055 141 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 EXOSC2Q13868 293 aaKnown RBP16.01■□□□□ 0.15
PNKP-212ENST00000599454 RCN1Q15293 331 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 C2orf76Q3KRA6 126 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 OGFRL1Q5TC84 451 aaPredicted RBP16.01■□□□□ 0.15
PNKP-212ENST00000599454 OSR1Q8TAX0 266 aaPredicted RBP16.01■□□□□ 0.15
PNKP-212ENST00000599454 DDB2Q92466 427 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 C5orf30Q96GV9 206 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 AKIP1Q9NQ31 210 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 SCN3BQ9NY72 215 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 ZNF230Q9UIE0 474 aaPredicted RBP16.01■□□□□ 0.15
PNKP-212ENST00000599454 RAB22AQ9UL26 194 aa16.01■□□□□ 0.15
PNKP-212ENST00000599454 RBM7Q9Y580 266 aaKnown RBP16.01■□□□□ 0.15
PNKP-212ENST00000599454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16■□□□□ 0.15
PNKP-212ENST00000599454 TRBV9A0A0B4J1U6 114 aa16■□□□□ 0.15
PNKP-212ENST00000599454 GSTT2P0CG29 244 aa16■□□□□ 0.15
PNKP-212ENST00000599454 GSTT2BP0CG30 244 aa16■□□□□ 0.15
PNKP-212ENST00000599454 CLDN12P56749 244 aa16■□□□□ 0.15
PNKP-212ENST00000599454 IRF3Q14653 427 aa16■□□□□ 0.15
PNKP-212ENST00000599454 CD300EQ496F6 205 aaPredicted RBP16■□□□□ 0.15
PNKP-212ENST00000599454 DYNLRB2Q8TF09 96 aa16■□□□□ 0.15
PNKP-212ENST00000599454 KCTD12Q96CX2 325 aaKnown RBP16■□□□□ 0.15
PNKP-212ENST00000599454 RAB3CQ96E17 227 aa16■□□□□ 0.15
PNKP-212ENST00000599454 ACTL6BO94805 426 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 CRYZL1O95825 349 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 DUTP33316 252 aaKnown RBP15.99■□□□□ 0.15
PNKP-212ENST00000599454 NECAP1Q8NC96 275 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 ACOT12Q8WYK0 555 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 SPIN2AQ99865 258 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 SPIN2BQ9BPZ2 258 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 FAM110AQ9BQ89 295 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 GINS4Q9BRT9 223 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 VCXQ9H320 206 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 KCNK7Q9Y2U2 307 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 V9GY05 133 aa15.99■□□□□ 0.15
PNKP-212ENST00000599454 TMEM272A0A1B0GTI8 110 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 ZNF785A8K8V0 405 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 CASQ2O14958 399 aaPredicted RBP15.98■□□□□ 0.15
PNKP-212ENST00000599454 GADD45AP24522 165 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 RPS25P62851 125 aaKnown RBP15.98■□□□□ 0.15
PNKP-212ENST00000599454 ZNF45Q02386 682 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 DEFB114Q30KQ6 69 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 SLC25A42Q86VD7 318 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 MMD2Q8IY49 270 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 TTC9CQ8N5M4 171 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 ZC4H2Q9NQZ6 224 aa15.98■□□□□ 0.15
PNKP-212ENST00000599454 TECRQ9NZ01 308 aaKnown RBP15.98■□□□□ 0.15
PNKP-212ENST00000599454 HYDINQ4G0P3 5121 aa15.97■□□□□ 0.15
PNKP-212ENST00000599454 RBMY1BA6NDE4 496 aaKnown RBP15.97■□□□□ 0.15
PNKP-212ENST00000599454 RBMY1EA6NEQ0 496 aaKnown RBP15.97■□□□□ 0.15
PNKP-212ENST00000599454 RBMY1DP0C7P1 496 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms