RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 SPSB4Q96A44 273 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 SFRP2Q96HF1 295 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 RAX2Q96IS3 184 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 KCNK17Q96T54 332 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 CHRNA10Q9GZZ6 450 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 IGHV3OR16-10A0A075B7F0 116 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 MARCH11A6NNE9 402 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 NPIPB8E9PQR5 432 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
SCN8A-208ENST00000599343 ZNF418Q8TF45 676 aaPredicted RBP10.15□□□□□ -0.78
SCN8A-208ENST00000599343 DMRTA2Q96SC8 542 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 DUSP15Q9H1R2 295 aaPredicted RBP10.15□□□□□ -0.78
SCN8A-208ENST00000599343 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.78
SCN8A-208ENST00000599343 PSMB11A5LHX3 300 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 Q5BKY6 102 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 OR11H4Q8NGC9 324 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 TXNDC17Q9BRA2 123 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 ODAMA1E959 279 aa10.15□□□□□ -0.79
SCN8A-208ENST00000599343 JOSD1Q15040 202 aaPredicted RBP10.15□□□□□ -0.79
SCN8A-208ENST00000599343 ZNF658BQ4V348 819 aaPredicted RBP10.15□□□□□ -0.79
SCN8A-208ENST00000599343 KIAA1551Q9HCM1 1747 aa10.15□□□□□ -0.79
SCN8A-208ENST00000599343 IGLV1-36A0A0B4J1U3 117 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 MOSP00540 346 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 IGHV3-23P01764 117 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 IL4P05112 153 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 HSPE1P61604 102 aaKnown RBP10.14□□□□□ -0.79
SCN8A-208ENST00000599343 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 TGIF1Q15583 401 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 APCDD1LQ8NCL9 501 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 LHFPL6Q9Y693 200 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 LRP5O75197 1615 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 A0A1W2PQF6 199 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 FOXI3A8MTJ6 420 aaPredicted RBP10.14□□□□□ -0.79
SCN8A-208ENST00000599343 CDX1P47902 265 aaPredicted RBP10.14□□□□□ -0.79
SCN8A-208ENST00000599343 TRBV20OR9-2A0A075B6H5 130 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 IGHV3OR16-13A0A075B7E8 117 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 IGHV3-74A0A0B4J1X5 117 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 CBLN1P23435 193 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 C18orf15Q96N68 181 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 TMEM70Q9BUB7 260 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 TMEM262E9PQX1 116 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 SNAI2O43623 268 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 CTAG1AP78358 180 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 SLC22A18ASQ8N1D0 253 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 FAM206AQ9NX38 181 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 SCN9AQ15858 1988 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 TRAV8-6A0A0B4J262 113 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 IGHV3-66A0A0C4DH42 116 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 LNP1A1A4G5 178 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 RRHO14718 337 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 NGFRP08138 427 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 OR51G1Q8NGK1 321 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 HIST1H2BAQ96A08 127 aa10.14□□□□□ -0.79
SCN8A-208ENST00000599343 RP1P56715 2156 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 NKX2-8O15522 239 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 GLIPR1P48060 266 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 RPS11P62280 158 aaKnown RBP eCLIP10.13□□□□□ -0.79
SCN8A-208ENST00000599343 WNT10AQ9GZT5 417 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 PPIAL4CA0A0B4J2A2 164 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 ATXN7O15265 892 aaPredicted RBP10.13□□□□□ -0.79
SCN8A-208ENST00000599343 ISG15P05161 165 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 PPIAL4GP0DN37 164 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
SCN8A-208ENST00000599343 NABP2Q9BQ15 211 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 FOXJ2Q9P0K8 574 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 DOCK1Q14185 1865 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 TRBV5-7A0A0A0MS05 114 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 RECKO95980 971 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
SCN8A-208ENST00000599343 TMEM187Q14656 261 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 SHISA5Q8N114 240 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 GGACTQ9BVM4 153 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 SMCHD1A6NHR9 2005 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 NPFFO15130 113 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 PIN1P1O15428 100 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 PCP4P48539 62 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 FOXA3P55318 350 aaPredicted RBP10.13□□□□□ -0.79
SCN8A-208ENST00000599343 LCN2P80188 198 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 ZNF600Q6ZNG1 722 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 LINC00518Q8N0U6 118 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 ST6GALNAC6Q969X2 333 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 C17orf51A8MQB3 221 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 C9JCJ5 164 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 MOSPD3O75425 235 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 TGFAP01135 160 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 DANCRP0C864 163 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 IFITM2Q01629 132 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 FAM106AQ4KMX7 169 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 LAMTOR1Q6IAA8 161 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 FOXC2Q99958 501 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 TCF19Q9Y242 345 aa10.13□□□□□ -0.79
SCN8A-208ENST00000599343 PAPPA2Q9BXP8 1791 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 MUC21A0A0G2JKD1 596 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 MUC21A0A140T8X8 626 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 MUC21Q5SSG8 566 aa10.12□□□□□ -0.79
SCN8A-208ENST00000599343 C1orf100Q5SVJ3 147 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms