RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 MPPED1O15442 326 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 FRMD6-AS1P0C7T7 363 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 GALP22466 123 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 AADACP22760 399 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 PJVKQ0ZLH3 352 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 TNXAQ16473 311 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 TMEM177Q53S58 311 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 SBSPONQ8IVN8 264 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 RCHY1Q96PM5 261 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
VRK3-216ENST00000599342 A0A0B4J203 849 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 SHISA3A0PJX4 238 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 TRIM64CA6NLI5 447 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 CREBL2O60519 120 aaPredicted RBP7.52□□□□□ -1.21
VRK3-216ENST00000599342 ACTL6BO94805 426 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 CRYZL1O95825 349 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 CRYGBP07316 175 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 DTYMKP23919 212 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 GABARAPL2P60520 117 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 UBE2KP61086 200 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 SSBP2P81877 361 aaPredicted RBP7.52□□□□□ -1.21
VRK3-216ENST00000599342 TATDN3Q17R31 274 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 C22orf42Q6IC83 251 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 Q6ZS49 121 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 HAPLN4Q86UW8 402 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 SGPP2Q8IWX5 399 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 H1FOOQ8IZA3 346 aaPredicted RBP7.52□□□□□ -1.21
VRK3-216ENST00000599342 TEX45Q8NA69 505 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 OR9G4Q8NGQ1 327 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 ACOT12Q8WYK0 555 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 C5orf30Q96GV9 206 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 USMG5Q96IX5 58 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 TINAGL1Q9GZM7 467 aaPredicted RBP7.52□□□□□ -1.21
VRK3-216ENST00000599342 RAB26Q9ULW5 256 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 COL7A1Q02388 2944 aa7.52□□□□□ -1.21
VRK3-216ENST00000599342 SMIM30A4D0T7 59 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 MSGN1A6NI15 193 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 SRRM4A7MD48 611 aaKnown RBP7.51□□□□□ -1.21
VRK3-216ENST00000599342 J3QRK9 145 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 MRPS14O60783 128 aaKnown RBP7.51□□□□□ -1.21
VRK3-216ENST00000599342 SCGNO76038 276 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 BRI3O95415 125 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 IGLV1-51P01701 117 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 CTXN2P0C2S0 81 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 OR9G9P0C7N8 305 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 APELAP0DMC3 54 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 CD36P16671 472 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 PSMB9P28065 219 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 DUTP33316 252 aaKnown RBP7.51□□□□□ -1.21
VRK3-216ENST00000599342 SYNJ2BPP57105 145 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 DEFA5Q01523 94 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 PRSS8Q16651 343 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 RPEL1Q2QD12 228 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 IDO2Q6ZQW0 420 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 KCTD9Q7L273 389 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 ZNF645Q8N7E2 425 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 OSR1Q8TAX0 266 aaPredicted RBP7.51□□□□□ -1.21
VRK3-216ENST00000599342 MUC7Q8TAX7 377 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 SRSF12Q8WXF0 261 aaKnown RBP7.51□□□□□ -1.21
VRK3-216ENST00000599342 DDB2Q92466 427 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 DCUN1D5Q9BTE7 237 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 ST6GALNAC5Q9BVH7 336 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 PEF1Q9UBV8 284 aaKnown RBP7.51□□□□□ -1.21
VRK3-216ENST00000599342 MRPS7Q9Y2R9 242 aaKnown RBP7.51□□□□□ -1.21
VRK3-216ENST00000599342 PRELID3BQ9Y3B1 194 aa7.51□□□□□ -1.21
VRK3-216ENST00000599342 IGKV1D-8A0A087WSZ0 117 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 FAM223BA6NKX1 122 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 LINC00473A8K010 186 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 NOTOA8MTQ0 251 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 H0Y980 276 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 FCGR3BO75015 233 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 SLC22A5O76082 557 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 IGHV4-30-4P0DP06 118 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 GNG2P59768 71 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 DYRK1AQ13627 763 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 KLF5Q13887 457 aaPredicted RBP7.5□□□□□ -1.21
VRK3-216ENST00000599342 CDNFQ49AH0 187 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 HACD4Q5VWC8 232 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 ZNF343Q6P1L6 599 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 GTSCR1Q86UQ5 136 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 NR2C2APQ86WQ0 139 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 FAM223AQ8IWN6 122 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 ADAD2Q8NCV1 583 aaKnown RBP7.5□□□□□ -1.21
VRK3-216ENST00000599342 FCGR1BQ92637 280 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 SPIN2AQ99865 258 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 SPIN2BQ9BPZ2 258 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 DCSTAMPQ9H295 470 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 PEMTQ9UBM1 199 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 ELF5Q9UKW6 265 aaPredicted RBP7.5□□□□□ -1.21
VRK3-216ENST00000599342 OR2W1Q9Y3N9 320 aa7.5□□□□□ -1.21
VRK3-216ENST00000599342 TMEM235A6NFC5 223 aa7.49□□□□□ -1.21
VRK3-216ENST00000599342 TUSC2O75896 110 aa7.49□□□□□ -1.21
VRK3-216ENST00000599342 OR2A4O95047 310 aa7.49□□□□□ -1.21
VRK3-216ENST00000599342 SAA1P0DJI8 122 aaPredicted RBP7.49□□□□□ -1.21
VRK3-216ENST00000599342 NFYAP23511 347 aaPredicted RBP7.49□□□□□ -1.21
VRK3-216ENST00000599342 FGF9P31371 208 aaPredicted RBP7.49□□□□□ -1.21
VRK3-216ENST00000599342 EXOSC2Q13868 293 aaKnown RBP7.49□□□□□ -1.21
VRK3-216ENST00000599342 CDK10Q15131 360 aa7.49□□□□□ -1.21
VRK3-216ENST00000599342 OR2B11Q5JQS5 317 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms