RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 HSD17B10Q99714 261 aaKnown RBP11.06□□□□□ -0.64
LIG1-218ENST00000599322 AIFM2Q9BRQ8 373 aa11.06□□□□□ -0.64
LIG1-218ENST00000599322 FUNDC2Q9BWH2 189 aa11.06□□□□□ -0.64
LIG1-218ENST00000599322 SLA2Q9H6Q3 261 aa11.06□□□□□ -0.64
LIG1-218ENST00000599322 FCN1O00602 326 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 SSX5O60225 188 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 CRYZL1O95825 349 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 IGLV1-40P01703 118 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 FCGR2CP31995 323 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 RORCP51449 518 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 CRIP2P52943 208 aaPredicted RBP11.05□□□□□ -0.64
LIG1-218ENST00000599322 LINC00205P59089 165 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 C18orf65Q6ZTR6 163 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 MINDY2Q8NBR6 621 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 LFNGQ8NES3 379 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 OR11H1Q8NG94 326 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 OR1N2Q8NGR9 330 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 TCTEX1D2Q8WW35 142 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 AP3S1Q92572 193 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 RAX2Q96IS3 184 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 COMMD3Q9UBI1 195 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 RBMX2Q9Y388 322 aaKnown RBP11.05□□□□□ -0.64
LIG1-218ENST00000599322 NUBP2Q9Y5Y2 271 aa11.05□□□□□ -0.64
LIG1-218ENST00000599322 TRIM64CA6NLI5 447 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 MPPED1O15442 326 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 FCGR3BO75015 233 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 PRSS3P35030 304 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 KIR2DS2P43631 304 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 UBE2KP61086 200 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 HERV-K104P61576 105 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 DCTN2Q13561 401 aaKnown RBP11.04□□□□□ -0.64
LIG1-218ENST00000599322 C9orf66Q5T8R8 295 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 ZNF66Q6ZN08 573 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 ETV3LQ6ZN32 361 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 ZNF491Q8N8L2 437 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 ZBTB34Q8NCN2 500 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 OR4S2Q8NH73 311 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 SECTM1Q8WVN6 248 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 CMTM3Q96MX0 182 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 FAM103A1Q9BTL3 118 aaKnown RBP11.04□□□□□ -0.64
LIG1-218ENST00000599322 NOTCH3Q9UM47 2321 aa11.04□□□□□ -0.64
LIG1-218ENST00000599322 A0A0G2JLM5 398 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 ARPC1BO15143 372 aaKnown RBP11.03□□□□□ -0.64
LIG1-218ENST00000599322 PRB2P02812 416 aaPredicted RBP11.03□□□□□ -0.64
LIG1-218ENST00000599322 TRGV3P03979 118 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 TGFBR1P36897 503 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 TPPP2P59282 170 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 TAS2R46P59540 309 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 VBP1P61758 197 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 NCS1P62166 190 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 ZNF616Q08AN1 781 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 CATR1Q13166 79 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 CDK10Q15131 360 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 GVQW1Q8N7I0 195 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 POC5Q8NA72 575 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 OR5AP2Q8NGF4 316 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 OR13F1Q8NGS4 319 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 MS4A10Q96PG2 267 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 OR5B12Q96R08 314 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 MRPS26Q9BYN8 205 aaKnown RBP11.03□□□□□ -0.64
LIG1-218ENST00000599322 SLC5A7Q9GZV3 580 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
LIG1-218ENST00000599322 C13orf42A0A1B0GVH6 325 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 H3BUA1 57 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 HRASP01112 189 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 APOA1P02647 267 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 S100GP29377 79 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 TAS2R20P59543 309 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 NDPQ00604 133 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 RUNX1Q01196 453 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 MSMO1Q15800 293 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 TNXAQ16473 311 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 GPR141Q7Z602 305 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 MMD2Q8IY49 270 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 OR5H2Q8NGV7 314 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 AURKAIP1Q9NWT8 199 aaPredicted RBP11.02□□□□□ -0.65
LIG1-218ENST00000599322 TAS2R8Q9NYW2 309 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 FBXO7Q9Y3I1 522 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 DNAH3Q8TD57 4116 aa11.02□□□□□ -0.65
LIG1-218ENST00000599322 MEIS3P1A6NDR6 274 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 LINC00473A8K010 186 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 FAM25AB3EWG3 89 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 FAM25CB3EWG5 89 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 FAM25GB3EWG6 89 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 SEC14L6B5MCN3 397 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 RAMP3O60896 148 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 PPYP01298 95 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 IGLV2-23P01705 113 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 FCER2P06734 321 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 AADACP22760 399 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 FXYD4P59646 89 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 DGCR2P98153 550 aa11.01□□□□□ -0.65
LIG1-218ENST00000599322 DEFB121Q5J5C9 76 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms