RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 MEF2BQ02080 365 aaPredicted RBP10.43□□□□□ -0.74
USHBP1-207ENST00000597928 HIST2H2BEQ16778 126 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.43□□□□□ -0.74
USHBP1-207ENST00000597928 RPP25LQ8N5L8 163 aaKnown RBP10.43□□□□□ -0.74
USHBP1-207ENST00000597928 FAM216AQ8WUB2 273 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 HIST1H2BHQ93079 126 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 HIST1H2BNQ99877 126 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 HIST1H2BMQ99879 126 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 DERL1Q9BUN8 251 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 SAMD10Q9BYL1 202 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 PARLQ9H300 379 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 MARCH11A6NNE9 402 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 TSTD3H0UI37 97 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 CYB5R3P00387 301 aaPredicted RBP10.43□□□□□ -0.74
USHBP1-207ENST00000597928 SOD3P08294 240 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 CECR9P0C854 216 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 SP9P0CG40 484 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 ZNF90Q03938 601 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 KHDC3LQ587J8 217 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 C9orf106Q8NAJ2 232 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 CA5BP1Q8WTZ4 195 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 OR2V2Q96R30 315 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 ZPBPQ9BS86 351 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 GPR87Q9BY21 358 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 CEP192Q8TEP8 1941 aa10.43□□□□□ -0.74
USHBP1-207ENST00000597928 BTBD17A6NE02 478 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 G0S2P27469 103 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 HSD17B10Q99714 261 aaKnown RBP10.42□□□□□ -0.74
USHBP1-207ENST00000597928 WDR61Q9GZS3 305 aaKnown RBP10.42□□□□□ -0.74
USHBP1-207ENST00000597928 TRAV3A0A0B4J244 114 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 LOC102723971A0A1B0GUV8 181 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 A0A1W2PRD5 423 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 A0A1W2PRF3 423 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 A0A1W2PRM7 423 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 C17orf112F2Z3M2 114 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 GYPAP02724 150 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 SMIM6P0DI80 62 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 ZNF705AQ6ZN79 300 aaPredicted RBP10.42□□□□□ -0.74
USHBP1-207ENST00000597928 FOXL2NBQ6ZUU3 175 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 OR4P4Q8NGL7 312 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 H3BTX0 84 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 KLK10O43240 276 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 HTD2P86397 168 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 KIAA1644Q3SXP7 199 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 ZNF585BQ52M93 769 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 BAGE3Q86Y29 109 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 BAGE2Q86Y30 109 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 RPRMLQ8N4K4 120 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 PPP1R35Q8TAP8 253 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 ITLN1Q8WWA0 313 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 IL36GQ9NZH8 169 aa10.42□□□□□ -0.74
USHBP1-207ENST00000597928 H0Y8G0 127 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 GNB1P62873 340 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 PYY3Q5JQD4 70 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 TCF23Q7RTU1 214 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 IMMP2LQ96T52 175 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 TMEM147Q9BVK8 224 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 TUBA4BQ9H853 241 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 SH2D2AQ9NP31 389 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 NTF3P20783 257 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 ACP1P24666 158 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 P2RY6Q15077 328 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 ACOT6Q3I5F7 207 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-207ENST00000597928 HEPN1Q6WQI6 88 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 MRGPRGQ86SM5 289 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 LRTM2Q8N967 370 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 OR10A7Q8NGE5 316 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 RNF138Q8WVD3 245 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 SNRNP40Q96DI7 357 aaKnown RBP10.41□□□□□ -0.74
USHBP1-207ENST00000597928 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 OOEPA6NGQ2 149 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 LINC00473A8K010 186 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 F6UZH7 168 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 SLC17A3O00476 420 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 RNF224P0DH78 156 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 SLC35E3Q7Z769 313 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 SARAFQ96BY9 339 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
USHBP1-207ENST00000597928 C10orf142B7Z368 130 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 ZNF726P1Q15940 193 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 CXXC4Q9H2H0 198 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 ZDHHC11Q9H8X9 412 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 TRAPPC1Q9Y5R8 145 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 LRRC30A6NM36 301 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 OR5G3P0C626 314 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 FXYD3Q14802 87 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 ZNF506Q5JVG8 444 aa10.4□□□□□ -0.74
USHBP1-207ENST00000597928 DUX4L9Q6RFH8 374 aaPredicted RBP10.4□□□□□ -0.74
USHBP1-207ENST00000597928 ADGRG4Q8IZF6 3080 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 A0A087X0M5 115 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 A0A1B0GX30 115 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 C21orf140B9A014 251 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 C1QTNF9P0C862 333 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 CD59P13987 128 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 CD1BP29016 333 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 ERVFC1-1P60608 527 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 FAM27E3Q08E93 113 aa10.4□□□□□ -0.75
USHBP1-207ENST00000597928 HAPLN4Q86UW8 402 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms