RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 NUDCD2Q8WVJ2 157 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 DDB2Q92466 427 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 ADTRPQ96IZ2 230 aa11.66□□□□□ -0.54
LIG1-215ENST00000597901 TMEM235A6NFC5 223 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 LINC01619G3V211 115 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 OVOL1O14753 267 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 SSX5O60225 188 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 IGHV3-11P01762 117 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 LGALS1P09382 135 aaKnown RBP11.65□□□□□ -0.54
LIG1-215ENST00000597901 NFYAP23511 347 aaPredicted RBP11.65□□□□□ -0.54
LIG1-215ENST00000597901 GNG2P59768 71 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 CBX3Q13185 183 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 RTL8BQ17RB0 113 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 KCTD21Q4G0X4 260 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 IDNKQ5T6J7 187 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 CNIH2Q6PI25 160 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 GRPEL2Q8TAA5 225 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.54
LIG1-215ENST00000597901 HARBI1Q96MB7 349 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 SLA2Q9H6Q3 261 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 RHBDL2Q9NX52 303 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 OR2W1Q9Y3N9 320 aa11.65□□□□□ -0.54
LIG1-215ENST00000597901 TRAV18A0A075B6X5 111 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 IGHV4OR15-8A0A075B7B6 117 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 A0A087WW49 117 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 LINC00473A8K010 186 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 TRGV3P03979 118 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 HSPB1P04792 205 aaKnown RBP11.64□□□□□ -0.55
LIG1-215ENST00000597901 INSL3P51460 131 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 SLURP1P55000 103 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 SCAND1P57086 179 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 TPPP2P59282 170 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 TEX45Q8NA69 505 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 TMEM68Q96MH6 324 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 PRR25Q96S07 402 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 B9D2Q9BPU9 175 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 ZNF355PQ9NSJ1 428 aa11.64□□□□□ -0.55
LIG1-215ENST00000597901 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
LIG1-215ENST00000597901 CRYZL1O95825 349 aa11.63□□□□□ -0.55
LIG1-215ENST00000597901 ZNF429Q86V71 674 aa11.63□□□□□ -0.55
LIG1-215ENST00000597901 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
LIG1-215ENST00000597901 POC5Q8NA72 575 aa11.63□□□□□ -0.55
LIG1-215ENST00000597901 ANXA10Q9UJ72 324 aa11.63□□□□□ -0.55
LIG1-215ENST00000597901 ETV7Q9Y603 341 aa11.63□□□□□ -0.55
LIG1-215ENST00000597901 MSGN1A6NI15 193 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 H3BUA1 57 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 SLC22A5O76082 557 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 IGLV2-14P01704 120 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 UBE2KP61086 200 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 PRSS8Q16651 343 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 VMA21Q3ZAQ7 101 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 OSR1Q8TAX0 266 aaPredicted RBP11.62□□□□□ -0.55
LIG1-215ENST00000597901 SLC25A38Q96DW6 304 aa11.62□□□□□ -0.55
LIG1-215ENST00000597901 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
LIG1-215ENST00000597901 RBMX2Q9Y388 322 aaKnown RBP11.62□□□□□ -0.55
LIG1-215ENST00000597901 IGKV1D-13A0A0B4J2D9 117 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 TUSC2O75896 110 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 BRI3O95415 125 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 IGKV1-13P0DP09 117 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
LIG1-215ENST00000597901 C11orf87Q6NUJ2 197 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 DCUN1D5Q9BTE7 237 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 DIABLOQ9NR28 239 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 SPATA2Q9UM82 520 aa11.61□□□□□ -0.55
LIG1-215ENST00000597901 A0A0A6YYH2 397 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 A0A0G2JLM5 398 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 C13orf42A0A1B0GVH6 325 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 A6NJ64 397 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 FCGR3BO75015 233 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 TMEM127O75204 238 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 SAP30O75446 220 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 ACSM6Q6P461 480 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 IDO2Q6ZQW0 420 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 HOGA1Q86XE5 327 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 GVQW1Q8N7I0 195 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 BEST4Q8NFU0 473 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 AUNIPQ9H7T9 357 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 RANGRFQ9HD47 186 aaPredicted RBP11.6□□□□□ -0.55
LIG1-215ENST00000597901 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
LIG1-215ENST00000597901 A0A087WXM4 84 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 APELAP0DMC3 54 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 PTHLHP12272 177 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 AADACP22760 399 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 TGFBR1P36897 503 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 RPS19P39019 145 aaKnown RBP11.59□□□□□ -0.55
LIG1-215ENST00000597901 EIF4EBP1Q13541 118 aaPredicted RBP11.59□□□□□ -0.55
LIG1-215ENST00000597901 TNXAQ16473 311 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 TIMM50Q3ZCQ8 353 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 MFSD4AQ8N468 514 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 TSPAN14Q8NG11 270 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 YIPF6Q96EC8 236 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 PHB2Q99623 299 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 TINAGL1Q9GZM7 467 aaPredicted RBP11.59□□□□□ -0.55
LIG1-215ENST00000597901 DNAH9Q9NYC9 4486 aa11.59□□□□□ -0.55
LIG1-215ENST00000597901 ANKRD34BA5PLL1 514 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 AIREO43918 545 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 LY86O95711 162 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 NHLRC4P0CG21 123 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms