RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 TMEM230Q96A57 120 aa12.33□□□□□ -0.44
SMCO4-206ENST00000596676 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
SMCO4-206ENST00000596676 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
SMCO4-206ENST00000596676 TPSG1Q9NRR2 321 aa12.33□□□□□ -0.44
SMCO4-206ENST00000596676 FLVCR2Q9UPI3 526 aa12.33□□□□□ -0.44
SMCO4-206ENST00000596676 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 LYRM1O43325 122 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 CTSDP07339 412 aaPredicted RBP12.32□□□□□ -0.44
SMCO4-206ENST00000596676 RPA2P15927 270 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 PSG5Q15238 335 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 TMEM95Q3KNT9 176 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 SP6Q3SY56 376 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 ABCA11PQ4W5N1 156 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 ZFAND1Q8TCF1 268 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
SMCO4-206ENST00000596676 CLCC1Q96S66 551 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 TSC22D3Q99576 134 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 FBXL15Q9H469 300 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 ZNF702PQ9H963 129 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
SMCO4-206ENST00000596676 FCN1O00602 326 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 MPPED1O15442 326 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 SLC25A17O43808 307 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 CRYBA1P05813 215 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 LPAR6P43657 344 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 RND3P61587 244 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 TAGLNQ01995 201 aaKnown RBP12.31□□□□□ -0.44
SMCO4-206ENST00000596676 RTL8BQ17RB0 113 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 C9orf152Q5JTZ5 239 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 C11orf88Q6PI97 169 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 CMTM1Q8IZ96 169 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 NPBQ8NG41 125 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 HARBI1Q96MB7 349 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 TP53RKQ96S44 253 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 PRR13Q9NZ81 148 aa12.31□□□□□ -0.44
SMCO4-206ENST00000596676 NAP1L6A6NFF2 107 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 SHOXO15266 292 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 NBR2O15453 112 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 S1PR2O95136 353 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 AKR1C4P17516 323 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 F2RP25116 425 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 RIPPLY3P57055 190 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 PJVKQ0ZLH3 352 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 CATR1Q13166 79 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 TMED4Q7Z7H5 227 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 OR4C13Q8NGP0 309 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
SMCO4-206ENST00000596676 HSPB9Q9BQS6 159 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
SMCO4-206ENST00000596676 C14orf166Q9Y224 244 aaKnown RBP12.3□□□□□ -0.44
SMCO4-206ENST00000596676 CENPXA8MT69 81 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 RRHO14718 337 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 NDUFB6O95139 128 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 NDUFA3O95167 84 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 CRYGBP07316 175 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 RRASP10301 218 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 MDKP21741 143 aaPredicted RBP12.29□□□□□ -0.44
SMCO4-206ENST00000596676 RAG2P55895 527 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 ASAH1Q13510 395 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
SMCO4-206ENST00000596676 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 MRGPRG-AS1Q2M3A8 158 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 C16orf82Q7Z2V1 217 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 OR4S2Q8NH73 311 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 DEDD2Q8WXF8 326 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 BORCS5Q969J3 196 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 MDFIQ99750 246 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 C7orf50Q9BRJ6 194 aaKnown RBP12.29□□□□□ -0.44
SMCO4-206ENST00000596676 C19orf24Q9BVV8 132 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 RAB18Q9NP72 206 aa12.29□□□□□ -0.44
SMCO4-206ENST00000596676 METTL1Q9UBP6 276 aaKnown RBP12.29□□□□□ -0.44
SMCO4-206ENST00000596676 C3orf85A0A1B0GTC6 90 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 FGF16O43320 207 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 SAA1P0DJI8 122 aaPredicted RBP12.28□□□□□ -0.44
SMCO4-206ENST00000596676 HKR1P10072 659 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 ECI1P42126 302 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 HIST2H2BDQ6DRA6 164 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 ZFAND2BQ8WV99 257 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 NPFFR1Q9GZQ6 430 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 NAA60Q9H7X0 242 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 BEX1Q9HBH7 125 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 LINC00527Q9UJ94 153 aa12.28□□□□□ -0.44
SMCO4-206ENST00000596676 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.45
SMCO4-206ENST00000596676 TEX13DA0A0J9YY54 714 aaPredicted RBP12.27□□□□□ -0.45
SMCO4-206ENST00000596676 CRYM-AS1A6NIL9 109 aa12.27□□□□□ -0.45
SMCO4-206ENST00000596676 RNF212BA8MTL3 300 aa12.27□□□□□ -0.45
SMCO4-206ENST00000596676 ARPC1BO15143 372 aaKnown RBP12.27□□□□□ -0.45
SMCO4-206ENST00000596676 TSPAN9O75954 239 aa12.27□□□□□ -0.45
SMCO4-206ENST00000596676 OR5AC1P0C628 307 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms