RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 THAP7Q9BT49 309 aaPredicted RBP12.23□□□□□ -0.45
LIM2-202ENST00000596399 RETNQ9HD89 108 aa12.23□□□□□ -0.45
LIM2-202ENST00000596399 SCN3BQ9NY72 215 aa12.23□□□□□ -0.45
LIM2-202ENST00000596399 PEF1Q9UBV8 284 aaKnown RBP12.23□□□□□ -0.45
LIM2-202ENST00000596399 TRBV6-7A0A0A0MS04 114 aa12.22□□□□□ -0.45
LIM2-202ENST00000596399 SHOXO15266 292 aa12.22□□□□□ -0.45
LIM2-202ENST00000596399 OR10A3P58181 314 aa12.22□□□□□ -0.45
LIM2-202ENST00000596399 TMEM177Q53S58 311 aa12.22□□□□□ -0.45
LIM2-202ENST00000596399 OR10J5Q8NHC4 309 aa12.22□□□□□ -0.45
LIM2-202ENST00000596399 PHB2Q99623 299 aa12.22□□□□□ -0.45
LIM2-202ENST00000596399 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
LIM2-202ENST00000596399 IGKV1D-8A0A087WSZ0 117 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 A0A0B4J203 849 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 SHISA3A0PJX4 238 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 LINC00473A8K010 186 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 J3QRK9 145 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 ARL6IP5O75915 188 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 SERPINB10P48595 397 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 AQP4P55087 323 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 TAGLNQ01995 201 aaKnown RBP12.21□□□□□ -0.45
LIM2-202ENST00000596399 TNXAQ16473 311 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 ADAD2Q8NCV1 583 aaKnown RBP12.21□□□□□ -0.45
LIM2-202ENST00000596399 NRG4Q8WWG1 115 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 RAB3CQ96E17 227 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 SPATA25Q9BR10 227 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 CCDC90BQ9GZT6 254 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 DUSP21Q9H596 190 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 ELF5Q9UKW6 265 aaPredicted RBP12.21□□□□□ -0.45
LIM2-202ENST00000596399 RAB22AQ9UL26 194 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 V9GY05 133 aa12.21□□□□□ -0.45
LIM2-202ENST00000596399 PLECQ15149 4684 aaKnown RBP12.21□□□□□ -0.46
LIM2-202ENST00000596399 H0Y980 276 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 RGS10O43665 173 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 EDN2P20800 178 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 MRPS15P82914 257 aaKnown RBP12.2□□□□□ -0.46
LIM2-202ENST00000596399 ZNF45Q02386 682 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 PRSS8Q16651 343 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 RPEL1Q2QD12 228 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 DDB2Q92466 427 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 TUBA4BQ9H853 241 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 SELENOKQ9Y6D0 94 aa12.2□□□□□ -0.46
LIM2-202ENST00000596399 BMPR1BO00238 502 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 MFNGO00587 321 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 BRI3O95415 125 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 CRYZL1O95825 349 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 AADACP22760 399 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 DUTP33316 252 aaKnown RBP12.19□□□□□ -0.46
LIM2-202ENST00000596399 MECP2P51608 486 aaKnown RBP12.19□□□□□ -0.46
LIM2-202ENST00000596399 MLLT11Q13015 90 aaPredicted RBP12.19□□□□□ -0.46
LIM2-202ENST00000596399 RTL8BQ17RB0 113 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 C19orf35Q6ZS72 473 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 OR10R2Q8NGX6 335 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 SRSF12Q8WXF0 261 aaKnown RBP12.19□□□□□ -0.46
LIM2-202ENST00000596399 USMG5Q96IX5 58 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 TMEM68Q96MH6 324 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 MGLLQ99685 303 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 FAM110AQ9BQ89 295 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 VCXQ9H320 206 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 AKIP1Q9NQ31 210 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 TPRKBQ9Y3C4 175 aa12.19□□□□□ -0.46
LIM2-202ENST00000596399 RBM7Q9Y580 266 aaKnown RBP12.19□□□□□ -0.46
LIM2-202ENST00000596399 TNCP24821 2201 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 RAB27BO00194 218 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 MPPED1O15442 326 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 OR9G9P0C7N8 305 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 UBE2KP61086 200 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 RHOGP84095 191 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 TRAM1Q15629 374 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 GTSCR1Q86UQ5 136 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 ACOT12Q8WYK0 555 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
LIM2-202ENST00000596399 ZNF430Q9H8G1 570 aaPredicted RBP12.18□□□□□ -0.46
LIM2-202ENST00000596399 PSMA1P25786 263 aaKnown RBP12.17□□□□□ -0.46
LIM2-202ENST00000596399 CBX3Q13185 183 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
LIM2-202ENST00000596399 SSX1Q16384 188 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 VMA21Q3ZAQ7 101 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 OR2B11Q5JQS5 317 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 LCN12Q6JVE5 192 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 H1FOOQ8IZA3 346 aaPredicted RBP12.17□□□□□ -0.46
LIM2-202ENST00000596399 Q8N402 240 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 TEX45Q8NA69 505 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 SNAPC3Q92966 411 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 SIGLEC8Q9NYZ4 499 aa12.17□□□□□ -0.46
LIM2-202ENST00000596399 SMIM30A4D0T7 59 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 PPP5D1E7EU14 171 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 OR2A4O95047 310 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
LIM2-202ENST00000596399 CD7P09564 240 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 SAA1P0DJI8 122 aaPredicted RBP12.16□□□□□ -0.46
LIM2-202ENST00000596399 RRASP10301 218 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 HIST1H1DP16402 221 aaKnown RBP12.16□□□□□ -0.46
LIM2-202ENST00000596399 CRHBPP24387 322 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 CD81P60033 236 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 TATDN3Q17R31 274 aa12.16□□□□□ -0.46
LIM2-202ENST00000596399 CD300EQ496F6 205 aaPredicted RBP12.16□□□□□ -0.46
LIM2-202ENST00000596399 NR2C2APQ86WQ0 139 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms