RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 A0A1W2PRX2 142 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 LINC00473A8K010 186 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 SLC25A17O43808 307 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 CRYZL1O95825 349 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 PF4V1P10720 104 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 HLA-DMAP28067 261 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 SLC6A1P30531 599 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 KIR2DS2P43631 304 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 RFX2P48378 723 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 FXYD4P59646 89 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 TSPAN5P62079 268 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 CX3CL1P78423 397 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 MRPS10P82664 201 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 FOXE3Q13461 319 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 PPP1R27Q86WC6 154 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 LYSMD2Q8IV50 215 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 MFSD4AQ8N468 514 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 ABHD5Q8WTS1 349 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 TCTEX1D2Q8WW35 142 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 FCAMRQ8WWV6 532 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 CLCC1Q96S66 551 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 ZNF2Q9BSG1 426 aaPredicted RBP13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 MIXL1Q9H2W2 232 aa13.59□□□□□ -0.23
SHKBP1-212ENST00000596163 TRAV41A0A0B4J266 112 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 ADARB2-AS1A8MUL3 147 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 ATP6V0E1O15342 81 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 FCGR3BO75015 233 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 IGLV2-14P01704 120 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 IGHG4P01861 327 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 HRH1P35367 487 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 CATR1Q13166 79 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 TMEM65Q6PI78 240 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 TCTEX1D1Q8N7M0 179 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 OR4S2Q8NH73 311 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 DIRAS2Q96HU8 199 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 C6orf62Q9GZU0 229 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 TAS2R8Q9NYW2 309 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 WSB1Q9Y6I7 421 aa13.58□□□□□ -0.24
SHKBP1-212ENST00000596163 FCN1O00602 326 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 CREBL2O60519 120 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 CNIH1O95406 144 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 CA2P00918 260 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 IGLV2-23P01705 113 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 UBE2KP61086 200 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 RPL23AP62750 156 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 RPL30P62888 115 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 CFHR3Q02985 330 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 PYHIN1Q6K0P9 492 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 LPCAT3Q6P1A2 487 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 TMEM17Q86X19 198 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 MCFD2Q8NI22 146 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 MOB3AQ96BX8 217 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 AIFM2Q9BRQ8 373 aa13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 RSL24D1Q9UHA3 163 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-212ENST00000596163 NUDT19A8MXV4 375 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 ZNF701M0R085 212 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 IFNA6P05013 189 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 CRYGBP07316 175 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 S100GP29377 79 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 CD40LGP29965 261 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 CRIP2P52943 208 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 SSBP1Q04837 148 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 EIF4EBP1Q13541 118 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 FXYD3Q14802 87 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 CMTM1Q8IZ96 169 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 POC5Q8NA72 575 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 OR52I2Q8NH67 350 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 ABHD1Q96SE0 405 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 MTFP1Q9UDX5 166 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 NUBP2Q9Y5Y2 271 aa13.56□□□□□ -0.24
SHKBP1-212ENST00000596163 SRRM4A7MD48 611 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 TNFSF12O43508 249 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 HRASP01112 189 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 PF4P02776 101 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 TBPP20226 339 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 IL18Q14116 193 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 ECSCRQ19T08 205 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 AKIRIN2Q53H80 203 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 VAX1Q5SQQ9 334 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 MINDY2Q8NBR6 621 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 VSTM2AQ8TAG5 236 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 CD300LFQ8TDQ1 290 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 TMEM68Q96MH6 324 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 KLK11Q9UBX7 282 aa13.55□□□□□ -0.24
SHKBP1-212ENST00000596163 TRRAPQ9Y4A5 3859 aa13.54□□□□□ -0.24
SHKBP1-212ENST00000596163 MGAM2Q2M2H8 2515 aa13.54□□□□□ -0.24
SHKBP1-212ENST00000596163 G3V318 75 aa13.54□□□□□ -0.24
SHKBP1-212ENST00000596163 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHKBP1-212ENST00000596163 PSMB8P28062 276 aa13.54□□□□□ -0.24
SHKBP1-212ENST00000596163 GNRHRP30968 328 aa13.54□□□□□ -0.24
SHKBP1-212ENST00000596163 CDX1P47902 265 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-212ENST00000596163 GNB1P62873 340 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms