RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 RTL8BQ17RB0 113 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 TBC1D26Q86UD7 250 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 OR4C13Q8NGP0 309 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 FLYWCH2Q96CP2 140 aaKnown RBP17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 RAB18Q9NP72 206 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 RAMP3O60896 148 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 CATR1Q13166 79 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 ABCA11PQ4W5N1 156 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 TMEM177Q53S58 311 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 RNF5Q99942 180 aa17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 SLC25A21Q9BQT8 299 aaPredicted RBP17.96■□□□□ 0.47
SNRNP70-204ENST00000595231 MPPED1O15442 326 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 CRYZL1O95825 349 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 F2RP25116 425 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 RELBQ01201 579 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 SPAG16Q8N0X2 631 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 NPBQ8NG41 125 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 OR8H1Q8NGG4 311 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 MOB4Q9Y3A3 225 aa17.95■□□□□ 0.46
SNRNP70-204ENST00000595231 SRRM4A7MD48 611 aaKnown RBP17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 PEX14O75381 377 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 S100GP29377 79 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 RPS16P62249 146 aaKnown RBP17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 BLCAPP62952 87 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 ASAH1Q13510 395 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 MMDQ15546 238 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 C11orf88Q6PI97 169 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 FAM71E2Q8N5Q1 922 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 C5orf56Q8N8D9 126 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 Q8N9W7 124 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 SCGB3A2Q96PL1 93 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 C1RLQ9NZP8 487 aa17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 C14orf166Q9Y224 244 aaKnown RBP17.94■□□□□ 0.46
SNRNP70-204ENST00000595231 NCBP2LA6PVI3 153 aaKnown RBP17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 RNF212BA8MTL3 300 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 RBFOX2O43251 390 aaKnown RBP eCLIP17.93■□□□□ 0.469e-12■■■□□ 15.8
SNRNP70-204ENST00000595231 VSIG10L2P0DP72 767 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 RBMS2Q15434 407 aaKnown RBP17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 DHRS7BQ6IAN0 325 aaPredicted RBP17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 ADAD2Q8NCV1 583 aaKnown RBP17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 COPZ2Q9P299 210 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 NBR2O15453 112 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 FGF16O43320 207 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 NDUFB6O95139 128 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 NDUFA3O95167 84 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 IGLV2-23P01705 113 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 KIR2DS2P43631 304 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 RIPPLY3P57055 190 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 ZNF585BQ52M93 769 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 OR4S2Q8NH73 311 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 TMEM230Q96A57 120 aa17.93■□□□□ 0.46
SNRNP70-204ENST00000595231 M0QZK8 103 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 SLC6A1P30531 599 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 LGALS7P47929 136 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 CBX3Q13185 183 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 KRTAP24-1Q3LI83 254 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 Q6ZS46 218 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 OSR1Q8TAX0 266 aaPredicted RBP17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 CD300LFQ8TDQ1 290 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 HARBI1Q96MB7 349 aa17.92■□□□□ 0.46
SNRNP70-204ENST00000595231 SH2D7A6NKC9 451 aaPredicted RBP17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 SHOXO15266 292 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 CRYBA1P05813 215 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 PSG5Q15238 335 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 Q6ZSV7 163 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 TCTEX1D1Q8N7M0 179 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 CCDC71LQ8N9Z2 235 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 POC5Q8NA72 575 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 NPFFR1Q9GZQ6 430 aa17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 LIN7CQ9NUP9 197 aaKnown RBP17.91■□□□□ 0.46
SNRNP70-204ENST00000595231 RRHO14718 337 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 TSPAN9O75954 239 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 TP53RKQ96S44 253 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 TSNAXQ99598 290 aaKnown RBP17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 C3orf85A0A1B0GTC6 90 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 CRYM-AS1A6NIL9 109 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 HPRT1P00492 218 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 C5orf64Q2M2E5 130 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 FBXL15Q9H469 300 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 PLEKHA2Q9HB19 425 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 FAM212BQ9NTI7 297 aaPredicted RBP17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 FLVCR2Q9UPI3 526 aa17.9■□□□□ 0.46
SNRNP70-204ENST00000595231 CRYGBP07316 175 aa17.89■□□□□ 0.45
SNRNP70-204ENST00000595231 TMED4Q7Z7H5 227 aa17.89■□□□□ 0.45
SNRNP70-204ENST00000595231 VKORC1L1Q8N0U8 176 aa17.89■□□□□ 0.45
SNRNP70-204ENST00000595231 RANBP3Q9H6Z4 567 aaPredicted RBP17.89■□□□□ 0.45
SNRNP70-204ENST00000595231 NAA60Q9H7X0 242 aa17.89■□□□□ 0.45
SNRNP70-204ENST00000595231 ZNF702PQ9H963 129 aa17.89■□□□□ 0.45
SNRNP70-204ENST00000595231 KIAA1456Q9P272 454 aa17.89■□□□□ 0.45
SNRNP70-204ENST00000595231 H0Y980 276 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 SLC25A17O43808 307 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 S1PR2O95136 353 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 SPDEFO95238 335 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 HKR1P10072 659 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 AKR1C4P17516 323 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 LPAR6P43657 344 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 SP6Q3SY56 376 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 MZT2BQ6NZ67 158 aa17.88■□□□□ 0.45
SNRNP70-204ENST00000595231 Q8N2B8 174 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms